RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 PPP1R14DQ9NXH3 145 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 EHFQ9NZC4 300 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 ARID1AO14497 2285 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 C1orf196B1AJZ1 125 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 NRASP01111 189 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 SFTPBP07988 381 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 SUPT4H1P63272 117 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 PMP22Q01453 160 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 CALHM1Q8IU99 346 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 GTF3AQ92664 365 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 PHYHIPLQ96FC7 376 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 RTBDNQ9BSG5 229 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 DEFB127Q9H1M4 99 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 ZNF629Q9UEG4 869 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 GPR132Q9UNW8 380 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 ZNF318Q5VUA4 2279 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 MEX3AA1L020 520 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 FAM221AA4D161 298 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 EEF1E1-BLOC1S5C9J1V9 151 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 RRADP55042 308 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 PPIAP62937 165 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 DAZAP2Q15038 168 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 RSU1Q15404 277 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 OR8B8Q15620 311 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 LHFPL1Q86WI0 220 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 ARRDC1Q8N5I2 433 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 PIGCQ92535 297 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 EMG1Q92979 244 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 PFDN5Q99471 154 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 FGF23Q9GZV9 251 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 RNF122Q9H9V4 155 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 PLEKHJ1Q9NW61 149 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 OSGIN2Q9Y236 505 aa13.13□□□□□ -0.31
SCAMP4-202ENST00000409472 A0A0D9SG52 128 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 GEMIN2O14893 280 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 SERPINA5P05154 406 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 PCBD1P61457 104 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 BHLHE23Q8NDY6 225 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 PHB2Q99623 299 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 SULT4A1Q9BR01 284 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 LIME1Q9H400 295 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 C12orf49Q9H741 205 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 ZNF292O60281 2723 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 DBX1A6NMT0 343 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 ADAP1O75689 374 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 FARS2O95363 451 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 SYNGR4O95473 234 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 GLRA1P23415 457 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 OPRM1P35372 400 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 RBP2P50120 134 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 CNN3Q15417 329 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 C10orf91Q5T1B1 145 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 Q6ZPA2 131 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 DEFB124Q8NES8 71 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 SPRR3Q9UBC9 169 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 PRSS50Q9UI38 385 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 AK3Q9UIJ7 227 aa13.12□□□□□ -0.31
SCAMP4-202ENST00000409472 RNF222A6NCQ9 220 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 ZNF850A8MQ14 1090 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 SERPINE3A8MV23 424 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 WISP2O76076 250 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 DUS4LO95620 317 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 AGTR1P30556 359 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 SRSF4Q08170 494 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 HABP2Q14520 560 aaPredicted RBP13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 PEA15Q15121 130 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 ANKRD55Q3KP44 614 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 OR2B11Q5JQS5 317 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 RPUSD3Q6P087 351 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 CLEC18BQ6UXF7 455 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 PEG10Q86TG7 708 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 FBXL14Q8N1E6 418 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 C1QTNF5Q9BXJ0 243 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 METTL9Q9H1A3 318 aa13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 METTL1Q9UBP6 276 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-202ENST00000409472 C5orf49A4QMS7 147 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 CEACAM18A8MTB9 384 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 C3orf80F5H4A9 247 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 CSTBP04080 98 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 CBR1P16152 277 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 SERPINF1P36955 418 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 GPX4P36969 197 aaPredicted RBP13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 OR3A2P47893 321 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 ACTBL2Q562R1 376 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 OR5AP2Q8NGF4 316 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 OR56B2PQ8NGI1 322 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 TCTEX1D2Q8WW35 142 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 LINC00470Q9BZP3 86 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 BCO1Q9HAY6 547 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms