RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 FLVCR2Q9UPI3 526 aa11.92□□□□□ -0.5
GPNMB-203ENST00000409458 ATP23Q9Y6H3 246 aa11.92□□□□□ -0.5
GPNMB-203ENST00000409458 ADGRG4Q8IZF6 3080 aa11.92□□□□□ -0.5
GPNMB-203ENST00000409458 USP24Q9UPU5 2620 aa11.92□□□□□ -0.5
GPNMB-203ENST00000409458 AMY2AP04746 511 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 CSN2P05814 226 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 ZNF735P0CB33 412 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 FUT3P21217 361 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 DUSP1P28562 367 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 HRH1P35367 487 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 IKZF1Q13422 519 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 IL13RA2Q14627 380 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 MPPED2Q15777 294 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 MPV17LQ2QL34 196 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 NCMAPQ5T1S8 102 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 AGAP6Q5VW22 663 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 LINC00596Q86U02 117 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 HOGA1Q86XE5 327 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 DMRTC2Q8IXT2 367 aaPredicted RBP11.91□□□□□ -0.5
GPNMB-203ENST00000409458 GALNT11Q8NCW6 608 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 OR51S1Q8NGJ8 323 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 ELMOD3Q96FG2 381 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 PLK3Q9H4B4 646 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 ZNF442Q9H7R0 627 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 NGBQ9NPG2 151 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 RCC2Q9P258 522 aaKnown RBP11.91□□□□□ -0.5
GPNMB-203ENST00000409458 ALG5Q9Y673 324 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 PLSCR5A0PG75 271 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 A6NLC8 198 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 SHISA9B4DS77 424 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 NDUFB6O95139 128 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 H2AFB2P0C5Z0 115 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 RBMXP38159 391 aaKnown RBP11.91□□□□□ -0.5
GPNMB-203ENST00000409458 CD200P41217 278 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 GMFBP60983 142 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 BTG1P62324 171 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
GPNMB-203ENST00000409458 SORDQ00796 357 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 TLE1Q04724 770 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 TFF3Q07654 80 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 NKPD1Q17RQ9 610 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 MICBQ29980 383 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 C4orf17Q53FE4 359 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 Q8IYB0 196 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 POC1AQ8NBT0 407 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 PLPPR2Q96GM1 343 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 CMSS1Q9BQ75 279 aaKnown RBP11.91□□□□□ -0.5
GPNMB-203ENST00000409458 NEURL2Q9BR09 285 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 ST6GALNAC5Q9BVH7 336 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 ESRP2Q9H6T0 727 aaKnown RBP11.91□□□□□ -0.5
GPNMB-203ENST00000409458 RHOFQ9HBH0 211 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 KCNJ16Q9NPI9 418 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 UFSP2Q9NUQ7 469 aa11.91□□□□□ -0.5
GPNMB-203ENST00000409458 ZNF701Q9NV72 531 aaPredicted RBP11.91□□□□□ -0.5
GPNMB-203ENST00000409458 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-203ENST00000409458 ARPC1BO15143 372 aaKnown RBP11.9□□□□□ -0.5
GPNMB-203ENST00000409458 SPRY3O43610 288 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 PMP2P02689 132 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 AMY2BP19961 511 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 SELENOVP59797 346 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 MZT1Q08AG7 82 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 MEF2DQ14814 521 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 ADIPOQQ15848 244 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 SPRNQ5BIV9 151 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 RNASE10Q5GAN6 216 aaKnown RBP11.9□□□□□ -0.5
GPNMB-203ENST00000409458 WDR82Q6UXN9 313 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 BPIFB2Q8N4F0 458 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 OR4K15Q8NH41 348 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 LRRC46Q96FV0 321 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 SLC6A7Q99884 636 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 GINS4Q9BRT9 223 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 HES4Q9HCC6 221 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 NDRG3Q9UGV2 375 aa11.9□□□□□ -0.5
GPNMB-203ENST00000409458 NBASA2RRP1 2371 aa11.9□□□□□ -0.51
GPNMB-203ENST00000409458 CHD3Q12873 2000 aaKnown RBP11.9□□□□□ -0.51
GPNMB-203ENST00000409458 IGKV1D-8A0A087WSZ0 117 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 FAM221AA4D161 298 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 PRSS44E7EML9 344 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 HSPB6O14558 160 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 WNT9BO14905 357 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 NOS1APO75052 506 aaPredicted RBP11.89□□□□□ -0.51
GPNMB-203ENST00000409458 NXPH2O95156 264 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 FCGR3AP08637 254 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 OR4A8P0C604 315 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 TBPP20226 339 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 CD300CQ08708 224 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 RBMS2Q15434 407 aaKnown RBP11.89□□□□□ -0.51
GPNMB-203ENST00000409458 Q6ZPA2 131 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 BEST4Q8NFU0 473 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 CHAC2Q8WUX2 184 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 MEGF10Q96KG7 1140 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 OR2V2Q96R30 315 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 C1orf123Q9NWV4 160 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 PLEKHA6Q9Y2H5 1048 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 HCFC1P51610 2035 aa11.89□□□□□ -0.51
GPNMB-203ENST00000409458 DISC1C4P0D8 188 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 SIAH2O43255 324 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 PTBP3O95758 552 aaKnown RBP11.88□□□□□ -0.51
GPNMB-203ENST00000409458 IGHV1-46P01743 117 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms