RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CHST4Q8NCG5 386 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 OR5D14Q8NGL3 314 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 LINC01006Q8NI28 216 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 TSEN15Q8WW01 171 aaKnown RBP7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 UBE2FQ969M7 185 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 FGGYQ96C11 551 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 LGALS12Q96DT0 336 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 ADAT3Q96EY9 351 aaPredicted RBP7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 C4orf36Q96KX1 117 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 SSX3Q99909 188 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 CITED1Q99966 193 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 NPFFR1Q9GZQ6 430 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 MEGF9Q9H1U4 602 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 GAL3ST2Q9H3Q3 398 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 TCF7L1Q9HCS4 588 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 EXOSC4Q9NPD3 245 aaKnown RBP7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 MTCH1Q9NZJ7 389 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 FRRS1LQ9P0K9 344 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 DHDHQ9UQ10 334 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 LINC00312Q9Y6C7 94 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 TRGV10A0A0A0MS01 117 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 LOC100130705A0A1B0GUX0 176 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 VGLL3A8MV65 326 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 E9PQ18 207 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 H3BSH0 61 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 ALDOBP05062 364 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 HCKP08631 526 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 IGHV1-8P0DP01 117 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 PIPP12273 146 aaPredicted RBP7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 CCL3L1P16619 93 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 PRKACAP17612 351 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 GABRR1P24046 479 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 COX7A1P24310 79 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 ERP29P30040 261 aaKnown RBP7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 PDZK1IP1Q13113 114 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 IL18R1Q13478 541 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 EDDM3AQ14507 147 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF273Q14593 569 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF146Q15072 292 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 LPCAT4Q643R3 524 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 OR52W1Q6IF63 320 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 TMPRSS11AQ6ZMR5 421 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 Q6ZSV7 163 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 TRAPPC6BQ86SZ2 158 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 SERPINA12Q8IW75 414 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 SETD9Q8NE22 299 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 OR4M1Q8NGD0 313 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 OR13C9Q8NGT0 318 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 OR5AK2Q8NH90 309 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 OR2T6Q8NHC8 308 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 RHOXF1Q8NHV9 184 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 RPS4Y2Q8TD47 263 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 MALSU1Q96EH3 234 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 PELI1Q96FA3 418 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 PPA2Q9H2U2 334 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 MMP27Q9H306 513 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 ZCCHC4Q9H5U6 513 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 SMPD3Q9NY59 655 aaPredicted RBP7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 FBLN5Q9UBX5 448 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 UBE2J1Q9Y385 318 aaPredicted RBP7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 SESN1Q9Y6P5 492 aa7.4□□□□□ -1.22
SNORD88A-201ENST00000408314 IGKV1-27A0A075B6S5 117 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 OR4C45A6NMZ5 311 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 SULT1B1O43704 296 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 KDM4BO94953 1096 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 BAG2O95816 211 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 ARG1P05089 322 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 GABRB1P18505 474 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 MYL12AP19105 171 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 RAB3AP20336 220 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 DCKP27707 260 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 P2RX3P56373 397 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 PROK1P58294 105 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 NANOS3P60323 173 aaKnown RBP7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 C2orf68Q2NKX9 166 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 CCDC58Q4VC31 144 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 MINOS1Q5TGZ0 78 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 TTC23Q5W5X9 447 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 ZNF626Q68DY1 528 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 HCP5Q6MZN7 132 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 ZNF782Q6ZMW2 699 aaPredicted RBP7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 Q6ZTK2 550 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 RTN4RL2Q86UN3 420 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 LHFPL3Q86UP9 236 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 RDH10Q8IZV5 341 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 BATF2Q8N1L9 274 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 PACRGLQ8N7B6 248 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 OR11H6Q8NGC7 330 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 CREB3L1Q96BA8 519 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 JAM3Q9BX67 310 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 HMG20AQ9NP66 347 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 MRPS18AQ9NVS2 196 aaKnown RBP7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 RBFOX1Q9NWB1 397 aaKnown RBP7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 FAM118AQ9NWS6 357 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 CHCHD3Q9NX63 227 aaKnown RBP7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 ERVK13-1Q9NX77 482 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 MINOS1-NBL1R4GNA1 71 aa7.39□□□□□ -1.23
SNORD88A-201ENST00000408314 IGKV1-9A0A0C4DH69 117 aa7.38□□□□□ -1.23
SNORD88A-201ENST00000408314 TMEM82A0PJX8 343 aa7.38□□□□□ -1.23
SNORD88A-201ENST00000408314 ODF3BA8MYP8 253 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms