RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	DHRS9	Q9BPW9	319 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	RYDEN	Q9NUL5	291 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PILRA	Q9UKJ1	303 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MYO7A	Q13402	2215 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CACNA1C	Q13936	2221 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PTBP3	O95758	552 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	IGKV1D-16	P01601	117 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR2B8P	P59922	312 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	FAHD2A	Q96GK7	314 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SLC26A1	Q9H2B4	701 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ZNF835	Q9Y2P0	537 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MEX3A	A1L020	520 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR3A1	P47881	315 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PDZD11	Q5EBL8	140 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ZNF501	Q96CX3	271 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	LY86	O95711	162 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	GABRA1	P14867	456 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR5AC1	P0C628	307 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	LIF	P15018	202 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SURF2	Q15527	256 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TMEM91	Q6ZNR0	172 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SLC22A18AS	Q8N1D0	253 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TMEM56	Q96MV1	263 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR2H1	Q9GZK4	316 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	COL11A2	P13942	1736 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	F5	P12259	2224 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SFTA3	P0C7M3	94 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SLC38A11	Q08AI6	406 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR6S1	Q8NH40	331 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	UCN2	Q96RP3	112 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR2D2	Q9H210	308 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	GPR35	Q9HC97	309 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	IGHV3-43	A0A0B4J1X8	118 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	FAM24A	A6NFZ4	105 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	IGHV3-43D	P0DP04	118 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	IL13RA2	Q14627	380 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ETFRF1	Q6IPR1	90 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	NDFIP1	Q9BT67	221 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SLC35D1	Q9NTN3	355 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ANXA10	Q9UJ72	324 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	AMDHD2	Q9Y303	409 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SOCS1	O15524	211 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CYTIP	O60759	359 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	RPL7L1	Q6DKI1	246 aa	Known RBP	11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR5D13	Q8NGL4	314 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	AKR1E2	Q96JD6	320 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MRGPRD	Q8TDS7	321 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CYB5R1	Q9UHQ9	305 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SMCHD1	A6NHR9	2005 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	FAM90A27P	A6NNH2	459 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MIDN	Q504T8	468 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PMS2CL	Q68D20	193 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	HES4	Q9HCC6	221 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PNLIP	P16233	465 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ASB5	Q8WWX0	329 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PRSS27	Q9BQR3	290 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CACNG5	Q9UF02	275 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MLF1	P58340	268 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SSX7	Q7RTT5	188 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	C11orf42	Q8N5U0	333 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR5C1	Q8NGR4	320 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	RPS4Y2	Q8TD47	263 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	GAL3ST2	Q9H3Q3	398 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TIMM9	Q9Y5J7	89 aa		11.73	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SHROOM3	Q8TF72	1996 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TRAV8-7	A0A075B6U6	113 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CNN1	P51911	297 aa	Known RBP	11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PJVK	Q0ZLH3	352 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	COL19A1	Q14993	1142 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TMEM211	Q6ICI0	200 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TMEM88	Q6PEY1	159 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SLC26A10	Q8NG04	563 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MAP6	Q96JE9	813 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CPN1	P15169	458 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR2C3	Q8N628	320 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	NIT2	Q9NQR4	276 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TXNDC12	O95881	172 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ZP3	P21754	424 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ZPLD1	Q8TCW7	415 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CCL17	Q92583	94 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454		A0A1W2PPQ1	181 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	DNPH1	O43598	174 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MMP16	P51512	607 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	HFE	Q30201	348 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	BLNK	Q8WV28	456 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ONECUT1	Q9UBC0	465 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	hADV38S2	A0JD32	116 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454		G3V3Q6	166 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	NGFR	P08138	427 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	H3F3A	P84243	136 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	DCAF10	Q5QP82	559 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	WDR13	Q9H1Z4	485 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MMP26	Q9NRE1	261 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	STARD10	Q9Y365	291 aa		11.72	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SMUG1	Q53HV7	270 aa		11.71	□□□□□ -0.53
CACNA1C-222	ENST00000406454	BARX1	Q9HBU1	254 aa	Predicted RBP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms