RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 GUK1Q16774 197 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 HLA-BQ31612 363 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 PIGYQ3MUY2 71 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 RIPPLY2Q5TAB7 128 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 AAED1Q7RTV5 226 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 FAM185AQ8N0U4 392 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 FBXL14Q8N1E6 418 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 OR2Y1Q8NGV0 311 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 IFI44Q8TCB0 444 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 PLSCR2Q9NRY7 297 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 ZNF816-ZNF321PA0A0X1KG74 233 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 ZNF716A6NP11 495 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 XRCC2O43543 280 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 PPT1P50897 306 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 HERV-K104P61576 105 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 S100A12P80511 92 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 PSG4Q00888 419 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 PHLDA2Q53GA4 152 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 OR4D5Q8NGN0 318 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 SFT2D1Q8WV19 159 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 FOXB1Q99853 325 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 PBDC1Q9BVG4 233 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 WFDC1Q9HC57 220 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 ZNF581Q9P0T4 197 aa9.3□□□□□ -0.92
CLIP4-204ENST00000404424 MASP2O00187 686 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 PHF1O43189 567 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-204ENST00000404424 DIRAS3O95661 229 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 CDS2O95674 445 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 P04436 131 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 B4GALT1P15291 398 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FUT3P21217 361 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 PTAFRP25105 342 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 KCNJ3P48549 501 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 RBM11P57052 281 aaKnown RBP9.29□□□□□ -0.92
CLIP4-204ENST00000404424 CTAG1AP78358 180 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 ZNF616Q08AN1 781 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 LFNGQ8NES3 379 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 OR52M1Q8NGK5 317 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 OR5L1Q8NGL2 311 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 AKR7LQ8NHP1 331 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 SCRT1Q9BWW7 348 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 OR2H1Q9GZK4 316 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 SMDT1Q9H4I9 107 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 RPS10P5Q9NQ39 176 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 C19orf12Q9NSK7 152 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 KIAA1549Q9HCM3 1950 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 RTTNQ86VV8 2226 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A10PA6NDY2 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A18PA6NE21 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A16PA6NEW6 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A20PA6NIJ5 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A8PA6NJQ4 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A7PA6NKC0 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A22PA8MWA6 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A12PA8MX19 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A5PA8MXJ8 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A23PA8MXZ1 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 C1orf196B1AJZ1 125 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 NME2P1O60361 137 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 MT-ND4LP03901 98 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A15PP0C7V4 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A13PP0C7W8 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A14PP0C7W9 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM90A24PP0C7X0 464 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 HOXB1P14653 301 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-204ENST00000404424 LMO1P25800 156 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 NTF4P34130 210 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 MEOX2P50222 304 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 ZNF92Q03936 586 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 HABP2Q14520 560 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-204ENST00000404424 SRSF7Q16629 238 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLIP4-204ENST00000404424 TSPO2Q5TGU0 170 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 PLCXD3Q63HM9 321 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 ABLIM2Q6H8Q1 611 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 Q6ZS49 121 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 GGNQ86UU5 652 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 OR14L1PQ8NHC6 308 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 C2CD4CQ8TF44 421 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 DYRK2Q92630 601 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 C14orf79Q96F83 325 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 BSCL2Q96G97 398 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-204ENST00000404424 EIF5A2Q9GZV4 153 aaKnown RBP9.29□□□□□ -0.92
CLIP4-204ENST00000404424 WNT5BQ9H1J7 359 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 FAM86C1Q9NVL1 165 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 LHX6Q9UPM6 363 aa9.29□□□□□ -0.92
CLIP4-204ENST00000404424 RCL1Q9Y2P8 373 aaKnown RBP9.29□□□□□ -0.92
CLIP4-204ENST00000404424 A0A1B0GW64 132 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 PRSS44E7EML9 344 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 GDF9O60383 454 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 PPYP01298 95 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 IGHEP01854 428 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 PRH1P02810 166 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 CLEC9AQ6UXN8 241 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ZNF561Q8N587 486 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 Q8NFD4 153 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 SLC39A7Q92504 469 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 PIGCQ92535 297 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 HIST1H2BAQ96A08 127 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 SPSB4Q96A44 273 aa9.28□□□□□ -0.92
CLIP4-204ENST00000404424 ALKBH3Q96Q83 286 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms