RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TRAT1Q6PIZ9 186 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 SIRT3Q9NTG7 399 aaPredicted RBP12.19□□□□□ -0.46
VAPA-202ENST00000400000 DYNLT3P51808 116 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 TOMM20LQ6UXN7 152 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 WDR61Q9GZS3 305 aaKnown RBP12.19□□□□□ -0.46
VAPA-202ENST00000400000 CXXC4Q9H2H0 198 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 UQCC1Q9NVA1 299 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 TCFL5Q9UL49 500 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 HRASP01112 189 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 SMIM12Q96EX1 92 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 TOX3O15405 576 aaPredicted RBP12.19□□□□□ -0.46
VAPA-202ENST00000400000 ZNF737O75373 536 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 TMEM97Q5BJF2 176 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 OR10A7Q8NGE5 316 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 VSTM2LQ96N03 204 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 PCM1Q15154 2024 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 RNASEK-C17orf49H0YIS7 233 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 CD96P40200 585 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 BTG1P62324 171 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 RIMKLAQ8IXN7 391 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 AHDC1Q5TGY3 1603 aaPredicted RBP12.18□□□□□ -0.46
VAPA-202ENST00000400000 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 PLPP3O14495 311 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 GUCA2BQ16661 112 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 LINC00615Q96LM1 132 aaPredicted RBP12.18□□□□□ -0.46
VAPA-202ENST00000400000 SLC25A19Q9HC21 320 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 MMP24Q9Y5R2 645 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 MYO5AQ9Y4I1 1855 aaKnown RBP12.18□□□□□ -0.46
VAPA-202ENST00000400000 DHRS3O75911 302 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 ZNF66Q6ZN08 573 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 ABI3BPQ7Z7G0 1075 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 DUSP18Q8NEJ0 188 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 CLDN20P56880 219 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 TCTE3Q8IZS6 198 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 TPRX1Q8N7U7 411 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 OR8B12Q8NGG6 310 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 SOSTQ9BQB4 213 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 A0A1B0GTQ1 180 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 CELA2AP08217 269 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 CD1EP15812 388 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 ACVR1Q04771 509 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 FUT7Q11130 342 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 PPP1R1AQ13522 171 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 TMEM229BQ8NBD8 167 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 RAB1CQ92928 201 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 GPR137Q96N19 417 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 PLEKHA2Q9HB19 425 aa12.18□□□□□ -0.46
VAPA-202ENST00000400000 FBP1P09467 338 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 CCL3P10147 92 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 COL13A1Q5TAT6 717 aaPredicted RBP12.17□□□□□ -0.46
VAPA-202ENST00000400000 GTF2H5Q6ZYL4 71 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 BAP18Q8IXM2 172 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 C5orf17Q8NAS9 161 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 VSIG4Q9Y279 399 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 FGF2P09038 288 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 CTLA4P16410 223 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 ASAH1Q13510 395 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 ZNF488Q96MN9 340 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 AMMECR1Q9Y4X0 333 aaPredicted RBP12.17□□□□□ -0.46
VAPA-202ENST00000400000 U3KQ87 197 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 IGHV5-10-1A0A0J9YXX1 117 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 hADV38S2A0JD32 116 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 TTRP02766 147 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 NXPH1P58417 271 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 RAB32Q13637 225 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 NKG7Q16617 165 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 P2RX4Q99571 388 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 CDCA4Q9BXL8 241 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 WDR13Q9H1Z4 485 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 RALYQ9UKM9 306 aaKnown RBP12.17□□□□□ -0.46
VAPA-202ENST00000400000 A0A0B4J2E0 115 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 A0A1B0GX12 115 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 ZNF137PP52743 207 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 ETFRF1Q6IPR1 90 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 OR2A5Q96R48 311 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 IGKV3OR2-268A0A0C4DH90 116 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 TGOLN2O43493 480 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 GNG7O60262 68 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 COX6B1P14854 86 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 POLR2GP62487 172 aaKnown RBP eCLIP12.17□□□□□ -0.46
VAPA-202ENST00000400000 AESQ08117 197 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 PIGYQ3MUY2 71 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 SLC25A30Q5SVS4 291 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 DHRS11Q6UWP2 260 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 VAMP8Q9BV40 100 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 PRDM14Q9GZV8 571 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 TBC1D26Q86UD7 250 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 ZNF485Q8NCK3 441 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 ZNF707Q96C28 371 aaPredicted RBP12.17□□□□□ -0.46
VAPA-202ENST00000400000 MBD1Q9UIS9 605 aaPredicted RBP12.17□□□□□ -0.46
VAPA-202ENST00000400000 SIGLEC7Q9Y286 467 aa12.17□□□□□ -0.46
VAPA-202ENST00000400000 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
VAPA-202ENST00000400000 ACAA2P42765 397 aaKnown RBP12.16□□□□□ -0.46
VAPA-202ENST00000400000 HIST1H1DP16402 221 aaKnown RBP12.16□□□□□ -0.46
VAPA-202ENST00000400000 ID4P47928 161 aa12.16□□□□□ -0.46
VAPA-202ENST00000400000 C11orf87Q6NUJ2 197 aa12.16□□□□□ -0.46
VAPA-202ENST00000400000 OR5R1Q8NH85 324 aa12.16□□□□□ -0.46
VAPA-202ENST00000400000 IL17BQ9UHF5 180 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms