RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CGB1A6NKQ9 187 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 H3BMH7 237 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 MT-ND4LP03901 98 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 FUT6P51993 359 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 PDCD1Q15116 288 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 SNAI3Q3KNW1 292 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 OR2L13Q8N349 312 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 C1orf162Q8NEQ5 155 aaPredicted RBP9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 JMJD8Q96S16 334 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 MAGT1Q9H0U3 335 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 GSX1Q9H4S2 264 aaPredicted RBP9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 DIMT1Q9UNQ2 313 aaKnown RBP9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 SF3B6Q9Y3B4 125 aaKnown RBP9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 FLVCR1Q9Y5Y0 555 aa9.78□□□□□ -0.84
CACNA1C-216ENST00000399638 PPP1R17O96001 155 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 VSIG10L2P0DP72 767 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 ORM2P19652 201 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 THBS4P35443 961 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 ZNF683Q8IZ20 524 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 OR1L1Q8NH94 360 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 TMEM101Q96IK0 257 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 C4orf45Q96LM5 186 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 CHRDL1Q9BU40 450 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 WDR13Q9H1Z4 485 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 A4GALTQ9NPC4 353 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 IL20Q9NYY1 176 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 VSIG4Q9Y279 399 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 KIF13AQ9H1H9 1805 aa9.77□□□□□ -0.84
CACNA1C-216ENST00000399638 A0A1W2PR48 441 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 KLK8O60259 260 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 ACTL6AO96019 429 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 CNN1P51911 297 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 SLC16A12Q6ZSM3 486 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 DDB2Q92466 427 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 JAM3Q9BX67 310 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 EXOSC3Q9NQT5 275 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 A4GNTQ9UNA3 340 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 GPX2P18283 190 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 CCR9P51686 369 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 MARVELD3Q96A59 401 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 CLDN23Q96B33 292 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 WDR61Q9GZS3 305 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 TRAV20A0A0B4J274 112 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 CELA2BP08218 269 aaPredicted RBP9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 CCR6P51684 374 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 PFN3P60673 137 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 RPL18Q07020 188 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 NSUN5P1Q3KNT7 163 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 BEND2Q8NDZ0 799 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 SEH1LQ96EE3 360 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 C19orf53Q9UNZ5 99 aaPredicted RBP9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 DDX60LQ5H9U9 1706 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 CTSLP07711 333 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 FAM87AP0C7U9 286 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 PSMB1P20618 241 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 DCAF12L2Q5VW00 463 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 Q8IYB0 196 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 SLC25A40Q8TBP6 338 aa9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 ACTR3CQ9C0K3 210 aaPredicted RBP9.77□□□□□ -0.85
CACNA1C-216ENST00000399638 IGHV4-34P06331 123 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 LIFP15018 202 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 CRISP2P16562 243 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 HLA-GP17693 338 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 PAX5Q02548 391 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 CTU2Q2VPK5 515 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF324BQ6AW86 544 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 CYHR1Q6ZMK1 362 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 FCRL1Q96LA6 429 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 FAAP24Q9BTP7 215 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 GSX2Q9BZM3 304 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 PLSCR2Q9NRY7 297 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF727A8MUV8 499 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 ZBTB42B2RXF5 422 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 FZD6O60353 706 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 DUS4LO95620 317 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 CCKARP32238 428 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF154Q13106 437 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 CXorf66Q5JRM2 361 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 RHOFQ9HBH0 211 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 MYO7AQ13402 2215 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 TMSB15BA0A087X1C1 80 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 IGHV5-10-1A0A0J9YXX1 117 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 SYT5O00445 386 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 PRR35P0CG20 571 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 D2HGDHQ8N465 521 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 OPN3Q9H1Y3 402 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 ALOX5APP20292 161 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 PCK2Q16822 640 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 ISXQ2M1V0 245 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 FAHD1Q6P587 224 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 MRGPRDQ8TDS7 321 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 PTX4Q96A99 478 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 CIB3Q96Q77 187 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 RNF7Q9UBF6 113 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 RPL29P47914 159 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 RBPMSQ93062 196 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 TBX15Q96SF7 602 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 SDF2Q99470 211 aa9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 C11orf54Q9H0W9 315 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-216ENST00000399638 FKBP11Q9NYL4 201 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms