RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SPINK4O60575 86 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 FAM3AP98173 230 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 TMEM229BQ8NBD8 167 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 HGDQ93099 445 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 CABLES2Q9BTV7 478 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 TRAV38-1A0A0B4J264 116 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 CD37P11049 281 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 DYNLRB2Q8TF09 96 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 ZG16BQ96DA0 208 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 SIGLEC7Q9Y286 467 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 LOC102723971A0A1B0GUV8 181 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 MED19A0JLT2 244 aaPredicted RBP12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 PYCARD-AS1I3L0S3 204 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 SMAD7O15105 426 aaKnown RBP12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 DHRS3O75911 302 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 SLC25A5P05141 298 aaKnown RBP12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 SLC37A1P57057 533 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 ZNF485Q8NCK3 441 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 SPSB1Q96BD6 273 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 SLC25A22Q9H936 323 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 PRR19A6NJB7 356 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 SLC17A2O00624 439 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 ICMTO60725 284 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 FOXO1Q12778 655 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 TGIF1Q15583 401 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 OR5D13Q8NGL4 314 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 DYNC2LI1Q8TCX1 351 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 SIRT5Q9NXA8 310 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 IL36GQ9NZH8 169 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 TRBV23-1A0A0A0MS06 115 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 SCO1O75880 301 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 LGALS7P47929 136 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 EIF4EBP2Q13542 120 aaPredicted RBP12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 FFAR4Q5NUL3 377 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 OR4F17Q8NGA8 305 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 IGHV3OR15-7A0A075B7D8 119 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 CALCRP30988 508 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 FOXL2P58012 376 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 DGAT2L6Q6ZPD8 337 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 GRAMD2BQ96HH9 432 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 K7ESF4 209 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 TMEM127O75204 238 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 HRASP01112 189 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 SPP1P10451 314 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 PTGFRP43088 359 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 TOMM34Q15785 309 aaPredicted RBP12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 ZNF260Q3ZCT1 412 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 HIKESHIQ53FT3 197 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 FXYD1O00168 92 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 FBP1P09467 338 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 CCL3P10147 92 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 CLDN20P56880 219 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 KRTDAPP60985 99 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 WFDC3Q8IUB2 231 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 OR1A1Q9P1Q5 309 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 TRAV1-2A0A0B4J238 106 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 A1L4Q6 167 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 HAX1O00165 279 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 APELAP0DMC3 54 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 BRS3P32247 399 aa12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 PCDHGA9Q9Y5G4 932 aaKnown RBP12.59□□□□□ -0.39
PCDHA11-201ENST00000398640 C16orf97H3BN30 126 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 CBLN3Q6UW01 205 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 A0A1B0GUH1 482 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 AMTP48728 403 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 FNDC7Q5VTL7 733 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 GSX2Q9BZM3 304 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 ZDHHC11Q9H8X9 412 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 C12orf10Q9HB07 376 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 NUP205Q92621 2012 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 PLPP3O14495 311 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 CDK2AP1O14519 115 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 LYZP61626 148 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 CLEC2AQ6UVW9 174 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 TIPARPQ7Z3E1 657 aaKnown RBP12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 ADRB1P08588 477 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 LIMS3P0CW19 117 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 LIMS4P0CW20 117 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 TMEM128Q5BJH2 165 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 ABHD3Q8WU67 409 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 NTMQ9P121 344 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 OR3A1P47881 315 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 ZFP36L2P47974 494 aaKnown RBP12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 OXA1LQ15070 435 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 ABHD14AQ9BUJ0 271 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 RAB18Q9NP72 206 aa12.58□□□□□ -0.4
PCDHA11-201ENST00000398640 ATG2BQ96BY7 2078 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 SNCGO76070 127 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 ORM2P19652 201 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 CDK5Q00535 292 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 PAX5Q02548 391 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 CHRDL1Q9BU40 450 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 GYPAP02724 150 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 CPN1P15169 458 aa12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 PEBP1P30086 187 aaKnown RBP12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 CDKN2AP42771 156 aaKnown RBP12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 ZNF574Q6ZN55 896 aaPredicted RBP12.57□□□□□ -0.4
PCDHA11-201ENST00000398640 FOXJ2Q9P0K8 574 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms