RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SSBP1Q04837 148 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ECSCRQ19T08 205 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ASPHD2Q6ICH7 369 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 OR8G2PQ6IF36 304 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 FBXW12Q6X9E4 464 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SLC38A9Q8NBW4 561 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 NFAM1Q8NET5 270 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 OR5AP2Q8NGF4 316 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 UBALD1Q8TB05 177 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SLC25A43Q8WUT9 341 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM230Q96A57 120 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CNTNAP3Q9BZ76 1288 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 DNTTIP1Q9H147 329 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 RHOFQ9HBH0 211 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 TAF9BQ9HBM6 251 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 NECAP2Q9NVZ3 263 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 KCNIP1Q9NZI2 227 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 FBXO7Q9Y3I1 522 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 GBF1Q92538 1859 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.33□□□□□ -1.724e-10■■■■■ 34.7
SMAD4-202ENST00000398417 A0A0J9YW62 118 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 OR7C1O76099 320 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CCL2P13500 99 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 RCC1P18754 421 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 OMGP23515 440 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CD80P33681 288 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 MMP16P51512 607 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 TAS2R46P59540 309 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 IKZF1Q13422 519 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ARL6IP1Q15041 203 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CEACAM16Q2WEN9 425 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 PLPPR5Q32ZL2 321 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ANKRD55Q3KP44 614 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 LINC00696Q6ZRV3 163 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ADGRG7Q96K78 797 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 LYZL4Q96KX0 146 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 UBE2E2Q96LR5 201 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 PRRX2Q99811 253 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 KCNK7Q9Y2U2 307 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF236Q9UL36 1845 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 TET2Q6N021 2002 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM218A2RU14 115 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ID4P47928 161 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 RTL6Q6ICC9 239 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 HOGA1Q86XE5 327 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 PUSL1Q8N0Z8 303 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 FBXL14Q8N1E6 418 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF561Q8N587 486 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CPNE4Q96A23 557 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SLAMF9Q96A28 289 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 PIK3IP1Q96FE7 263 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 RAB33BQ9H082 229 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SIP14410 1827 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 A0A0A6YYD4 124 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 A0A1B0GTI1 187 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF785A8K8V0 405 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 M0R2Z0 102 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 MRPL33O75394 65 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 IGHMP01871 453 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SRSF3P84103 164 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CLINT1Q14677 625 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 C3AR1Q16581 482 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 PAN3Q58A45 887 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 DRAM2Q6UX65 266 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 MRPL21Q7Z2W9 205 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 AGBL5Q8NDL9 886 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 REEP6Q96HR9 211 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 MAGT1Q9H0U3 335 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SLC2A9Q9NRM0 540 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 WNT16Q9UBV4 365 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 KLK10O43240 276 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 IL2RAP01589 272 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ANOS1P23352 680 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 RBP2P50120 134 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 MALLQ13021 153 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CDCP2Q5VXM1 449 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 DHRS13Q6UX07 377 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF441Q8N8Z8 693 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 BHLHE23Q8NDY6 225 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 MITD1Q8WV92 249 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 OIT3Q8WWZ8 545 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 RHOVQ96L33 236 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 UTP23Q9BRU9 249 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 FABP6P51161 128 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SNRPEP62304 92 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM128Q5BJH2 165 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 PDZD11Q5EBL8 140 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 TEX30Q5JUR7 227 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 MARVELD3Q96A59 401 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 MRPL13Q9BYD1 178 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 IFT22Q9H7X7 185 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 BIN3Q9NQY0 253 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 PLA2G3Q9NZ20 509 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 PISDQ9UG56 409 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 AK3Q9UIJ7 227 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CADP27708 2225 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 IGHV5-10-1A0A0J9YXX1 117 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 SNAPINO95295 136 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF32P17041 273 aa4.32□□□□□ -1.72
SMAD4-202ENST00000398417 PTGFRP43088 359 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms