RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 GTF2A1LQ9UNN4 478 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 RHBDD3Q9Y3P4 386 aa13.04□□□□□ -0.32
CUX2-202ENST00000397643 A0A1W2PQ09 198 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 TBX1O43435 398 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 ANGPTL7O43827 346 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 HTR1AP08908 422 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 ACAA1P09110 424 aaPredicted RBP13.03□□□□□ -0.32
CUX2-202ENST00000397643 WNT4P56705 351 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 BCL2L15Q5TBC7 163 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 ZNF773Q6PK81 442 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 WFDC9Q8NEX5 89 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 OR4F17Q8NGA8 305 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 OR5D13Q8NGL4 314 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 OR10Z1Q8NGY1 313 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 RPL3LQ92901 407 aaKnown RBP13.03□□□□□ -0.32
CUX2-202ENST00000397643 PELI1Q96FA3 418 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 REEP6Q96HR9 211 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 OR4F4Q96R69 305 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 PAPOLGQ9BWT3 736 aaKnown RBP13.03□□□□□ -0.32
CUX2-202ENST00000397643 PBOV1Q9GZY1 135 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 ZNF319Q9P2F9 582 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 OR52A1Q9UKL2 312 aa13.03□□□□□ -0.32
CUX2-202ENST00000397643 SRSF10O75494 262 aaKnown RBP13.02□□□□□ -0.33
CUX2-202ENST00000397643 IGLL1P15814 213 aa13.02□□□□□ -0.33
CUX2-202ENST00000397643 NDUFB7P17568 137 aa13.02□□□□□ -0.33
CUX2-202ENST00000397643 GSK3AP49840 483 aa13.02□□□□□ -0.33
CUX2-202ENST00000397643 MFGE8Q08431 387 aaPredicted RBP13.02□□□□□ -0.33
CUX2-202ENST00000397643 BLMHQ13867 455 aa13.02□□□□□ -0.33
CUX2-202ENST00000397643 FDX2Q6P4F2 183 aa13.02□□□□□ -0.33
CUX2-202ENST00000397643 CCBE1Q6UXH8 406 aaPredicted RBP13.02□□□□□ -0.33
CUX2-202ENST00000397643 MED30Q96HR3 178 aa13.02□□□□□ -0.33
CUX2-202ENST00000397643 WNT10AQ9GZT5 417 aa13.02□□□□□ -0.33
CUX2-202ENST00000397643 NUFIP1Q9UHK0 495 aaKnown RBP13.02□□□□□ -0.33
CUX2-202ENST00000397643 ZNF222Q9UK12 451 aa13.02□□□□□ -0.33
CUX2-202ENST00000397643 IGKV1D-17A0A075B6S4 117 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 A0A087WXM4 84 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 TRBV23-1A0A0A0MS06 115 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 AKR7A2O43488 359 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 CFL1P23528 166 aaKnown RBP13.01□□□□□ -0.33
CUX2-202ENST00000397643 MAP2K4P45985 399 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 TAS2R43P59537 309 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 ALKBH1Q13686 389 aaKnown RBP13.01□□□□□ -0.33
CUX2-202ENST00000397643 SPHARQ15513 63 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 TBCEQ15813 527 aaPredicted RBP13.01□□□□□ -0.33
CUX2-202ENST00000397643 TIGD6Q17RP2 521 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 CCDC58Q4VC31 144 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 FAM76BQ5HYJ3 339 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 CATSPERDQ86XM0 798 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 MKXQ8IYA7 352 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 SPARTQ8N0X7 666 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 C11orf42Q8N5U0 333 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 ZNF485Q8NCK3 441 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 ZNRF1Q8ND25 227 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 TSPAN14Q8NG11 270 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 OR2G2Q8NGZ5 317 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 HPSE2Q8WWQ2 592 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 NKX3-1Q99801 234 aaPredicted RBP13.01□□□□□ -0.33
CUX2-202ENST00000397643 MICU1Q9BPX6 476 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 RGCCQ9H4X1 137 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 C19orf12Q9NSK7 152 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 NLKQ9UBE8 527 aa13.01□□□□□ -0.33
CUX2-202ENST00000397643 OR2AT4A6NND4 320 aa13□□□□□ -0.33
CUX2-202ENST00000397643 VGLL3A8MV65 326 aa13□□□□□ -0.33
CUX2-202ENST00000397643 E9PI62 339 aa13□□□□□ -0.33
CUX2-202ENST00000397643 ACKR3P25106 362 aa13□□□□□ -0.33
CUX2-202ENST00000397643 GNALP38405 381 aa13□□□□□ -0.33
CUX2-202ENST00000397643 CCR9P51686 369 aa13□□□□□ -0.33
CUX2-202ENST00000397643 MED22Q15528 200 aa13□□□□□ -0.33
CUX2-202ENST00000397643 GFOD2Q3B7J2 385 aa13□□□□□ -0.33
CUX2-202ENST00000397643 RPL22L1Q6P5R6 122 aaKnown RBP13□□□□□ -0.33
CUX2-202ENST00000397643 ELMOD2Q8IZ81 293 aa13□□□□□ -0.33
CUX2-202ENST00000397643 DYNAPQ8N1N2 210 aa13□□□□□ -0.33
CUX2-202ENST00000397643 DTX3Q8N9I9 347 aa13□□□□□ -0.33
CUX2-202ENST00000397643 CSNK2A3Q8NEV1 391 aa13□□□□□ -0.33
CUX2-202ENST00000397643 OR8B12Q8NGG6 310 aa13□□□□□ -0.33
CUX2-202ENST00000397643 OR5P3Q8WZ94 311 aa13□□□□□ -0.33
CUX2-202ENST00000397643 RTL8AQ9BWD3 113 aa13□□□□□ -0.33
CUX2-202ENST00000397643 ACOT13Q9NPJ3 140 aa13□□□□□ -0.33
CUX2-202ENST00000397643 SLC22A13Q9Y226 551 aa13□□□□□ -0.33
CUX2-202ENST00000397643 TCF19Q9Y242 345 aa13□□□□□ -0.33
CUX2-202ENST00000397643 LSM2Q9Y333 95 aaKnown RBP13□□□□□ -0.33
CUX2-202ENST00000397643 TRBV2A0A0J9YWF9 115 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 A0A0U1RQV5 110 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 FAM90A8PA6NJQ4 464 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 TMEM210A6NLX4 147 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 ANXA2P2A6NMY6 339 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 RPSAP08865 295 aaKnown RBP12.99□□□□□ -0.33
CUX2-202ENST00000397643 BDH1Q02338 343 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 PRDX4Q13162 271 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 Q6ZS46 218 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 ZNF367Q7RTV3 350 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 COMMD2Q86X83 199 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 FAM185AQ8N0U4 392 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 PRSS35Q8N3Z0 413 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 FCGR1BQ92637 280 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 RNF166Q96A37 237 aaPredicted RBP12.99□□□□□ -0.33
CUX2-202ENST00000397643 OR5M11Q96RB7 305 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 VCX3AQ9NNX9 186 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 FRRS1LQ9P0K9 344 aa12.99□□□□□ -0.33
CUX2-202ENST00000397643 WI2-2373I1.2A0A1W2PRP0 233 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms