RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 GDNFP39905 211 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 CBX5P45973 191 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 INPP1P49441 399 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 ACTBP60709 375 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 ACTG1P63261 375 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 PIGYQ3MUY2 71 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 MUC15Q8N387 334 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 NEUROG1Q92886 237 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 OCSTAMPQ9BR26 566 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 PECRQ9BY49 303 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 EGLN1Q9GZT9 426 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 PLEKHJ1Q9NW61 149 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 ANAPC10Q9UM13 185 aa11.5□□□□□ -0.57
MCF2L-209ENST00000397036 FLNCQ14315 2725 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 ANKRD20A5PA0PJZ0 165 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 MEIOCA2RUB1 952 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 CLEC18AA5D8T8 446 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 TMEM235A6NFC5 223 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 A6NLC8 198 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 SRRM5B3KS81 715 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 IFNL4K9M1U5 179 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 PTTG1O95997 202 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 GABRR1P24046 479 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 KLF9Q13886 244 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-209ENST00000397036 OXA1LQ15070 435 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 PRAMEF6Q5VXH4 476 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 FIP1L1Q6UN15 594 aaKnown RBP11.49□□□□□ -0.57
MCF2L-209ENST00000397036 CLEC18BQ6UXF7 455 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 TOMM5Q8N4H5 51 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 POC5Q8NA72 575 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 CLEC18CQ8NCF0 446 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 ITLN1Q8WWA0 313 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 EMG1Q92979 244 aaKnown RBP11.49□□□□□ -0.57
MCF2L-209ENST00000397036 FAIMQ9NVQ4 179 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 C1orf123Q9NWV4 160 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 KLK11Q9UBX7 282 aa11.49□□□□□ -0.57
MCF2L-209ENST00000397036 HS3ST1O14792 307 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 OR7C1O76099 320 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-209ENST00000397036 NXPH2O95156 264 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 KNG1P01042 644 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 PTHLHP12272 177 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 PRKACAP17612 351 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 NAT1P18440 290 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 LMO1P25800 156 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 PPOXP50336 477 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 SRSF1Q07955 248 aaKnown RBP eCLIP11.48□□□□□ -0.57
MCF2L-209ENST00000397036 Q6P435 159 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 MEX3BQ6ZN04 569 aaKnown RBP11.48□□□□□ -0.57
MCF2L-209ENST00000397036 ACP7Q6ZNF0 438 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 DTX2Q86UW9 622 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 FBXW5Q969U6 566 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 CHST6Q9GZX3 395 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 ZMAT3Q9HA38 289 aaKnown RBP11.48□□□□□ -0.57
MCF2L-209ENST00000397036 GCM1Q9NP62 436 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 GLS2Q9UI32 602 aa11.48□□□□□ -0.57
MCF2L-209ENST00000397036 NAP1L6A6NFF2 107 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 A6NNC1 897 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 CENPXA8MT69 81 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 SH2D1BO14796 132 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 CSF1P09603 554 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 RCVRNP35243 200 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 GNG2P59768 71 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 SNRPD2P62316 118 aaKnown RBP11.47□□□□□ -0.57
MCF2L-209ENST00000397036 SRSF7Q16629 238 aaKnown RBP eCLIP11.47□□□□□ -0.57
MCF2L-209ENST00000397036 SMIM21Q3B7S5 101 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 AGAP6Q5VW22 663 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 SHEQ5VZ18 495 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 ZNF57Q68EA5 555 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-209ENST00000397036 MZT2BQ6NZ67 158 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 ZNF826PQ6ZT77 177 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 C6orf201Q7Z4U5 140 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 TMEM229BQ8NBD8 167 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 OR11L1Q8NGX0 322 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 HPS1Q92902 700 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 GCDHQ92947 438 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-209ENST00000397036 COX4I2Q96KJ9 171 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 DYNLRB1Q9NP97 96 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 CBLN4Q9NTU7 201 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 UFSP2Q9NUQ7 469 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 TREM2Q9NZC2 230 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 RNF7Q9UBF6 113 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 NPTNQ9Y639 398 aa11.47□□□□□ -0.57
MCF2L-209ENST00000397036 ARFGEF3Q5TH69 2177 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 LYRM1O43325 122 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 SSX5O60225 188 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 DANCRP0C864 163 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 TBPP20226 339 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 GLRA1P23415 457 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 DTYMKP23919 212 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 GUCA2AQ02747 115 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 RBM39Q14498 530 aaKnown RBP11.46□□□□□ -0.57
MCF2L-209ENST00000397036 DCDC5Q6ZRR9 648 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 GDPD3Q7L5L3 318 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 MOGAT3Q86VF5 341 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 GCSAMQ8N6F7 178 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 DUSP18Q8NEJ0 188 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 LRRC29Q8WV35 223 aa11.46□□□□□ -0.57
MCF2L-209ENST00000397036 C11orf54Q9H0W9 315 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-209ENST00000397036 RIMS4Q9H426 269 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms