RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 DKK1O94907 266 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 TIAF1O95411 115 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 ARG1P05089 322 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 HEXBP07686 556 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 FBP1P09467 338 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 NQO2P16083 231 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 GABRR1P24046 479 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 RPS23P62266 143 aaKnown RBP11.58□□□□□ -0.56
TRIM40-207ENST00000396581 H3F3AP84243 136 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 ZFP36L1Q07352 338 aaKnown RBP11.58□□□□□ -0.56
TRIM40-207ENST00000396581 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 TCEAL6Q6IPX3 200 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 FADS6Q8N9I5 356 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 OR5L2Q8NGL0 311 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 SPSB1Q96BD6 273 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 C20orf24Q9BUV8 137 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 SH3BGRL3Q9H299 93 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 TRBV11-1A0A0K0K1C0 115 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 SCRG1O75711 98 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 C1QL1O75973 258 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 IFNA17P01571 189 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 CHATP28329 748 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 HTR5AP47898 357 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 CSNK1A1P48729 337 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 TRA2AQ13595 282 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRIM40-207ENST00000396581 SP6Q3SY56 376 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 NKAIN1Q4KMZ8 207 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 ADAM5Q6NVV9 412 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 PPP1R3BQ86XI6 285 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 LGI3Q8N145 548 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 ZNF565Q8N9K5 539 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 OR52M1Q8NGK5 317 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 PIGTQ969N2 578 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 METTL9Q9H1A3 318 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 TCFL5Q9UL49 500 aa11.57□□□□□ -0.56
TRIM40-207ENST00000396581 F5H5K5 113 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 DIRAS3O95661 229 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 OPN1LWP04000 364 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 KLK2P20151 261 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 HOXA5P20719 270 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 PPP1CCP36873 323 aaKnown RBP11.56□□□□□ -0.56
TRIM40-207ENST00000396581 IL11RAQ14626 422 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 ACER2Q5QJU3 275 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 ZNF385CQ66K41 422 aaPredicted RBP11.56□□□□□ -0.56
TRIM40-207ENST00000396581 OR10G3Q8NGC4 313 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 MUCL1Q96DR8 90 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 FAAP24Q9BTP7 215 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 RSRP1Q9BUV0 290 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 HIPK2Q9H2X6 1198 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 SLC2A9Q9NRM0 540 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 FBXO7Q9Y3I1 522 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 TMED3Q9Y3Q3 217 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 CCDC187A0A096LP49 1063 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 LNP1A1A4G5 178 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 OR5H15A6NDH6 313 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 XRCC2O43543 280 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 GATCO43716 136 aaKnown RBP11.56□□□□□ -0.56
TRIM40-207ENST00000396581 PRH1P02810 166 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 FGF5P12034 268 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 ACP1P24666 158 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 CLDN17P56750 224 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 NHLH2Q02577 135 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 ABCA11PQ4W5N1 156 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 HIKESHIQ53FT3 197 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 IGSF11Q5DX21 431 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 PHYHD1Q5SRE7 291 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 FBXW12Q6X9E4 464 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 SLC22A8Q8TCC7 542 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 MOB3AQ96BX8 217 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 MARS2Q96GW9 593 aaKnown RBP11.56□□□□□ -0.56
TRIM40-207ENST00000396581 BOD1Q96IK1 185 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 SYT3Q9BQG1 590 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 METTL7AQ9H8H3 244 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 ELL3Q9HB65 397 aaPredicted RBP11.56□□□□□ -0.56
TRIM40-207ENST00000396581 OCIAD1Q9NX40 245 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 MYOTQ9UBF9 498 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 RCL1Q9Y2P8 373 aaKnown RBP11.56□□□□□ -0.56
TRIM40-207ENST00000396581 DMRT1Q9Y5R6 373 aa11.56□□□□□ -0.56
TRIM40-207ENST00000396581 A0A087WWC5 75 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 BTBD17A6NE02 478 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 ZNF850A8MQ14 1090 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 M0R135 149 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 TXNL1O43396 289 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 CD63P08962 238 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 RRADP55042 308 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 OR2B8PP59922 312 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 SPSB3Q6PJ21 355 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 WDSUB1Q8N9V3 476 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 CD300LFQ8TDQ1 290 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 TOMM40LQ969M1 308 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 ZNF799Q96GE5 643 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 NOSIPQ9Y314 301 aaKnown RBP11.55□□□□□ -0.56
TRIM40-207ENST00000396581 OR2C1O95371 312 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 GUCA1AP43080 201 aaPredicted RBP11.55□□□□□ -0.56
TRIM40-207ENST00000396581 MTCP1P56278 107 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 EWSR1Q01844 656 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRIM40-207ENST00000396581 TAF9Q16594 264 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 TMEM176BQ3YBM2 270 aaPredicted RBP11.55□□□□□ -0.56
TRIM40-207ENST00000396581 SOHLH1Q5JUK2 328 aa11.55□□□□□ -0.56
TRIM40-207ENST00000396581 HSD17B11Q8NBQ5 300 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms