RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 GAL3ST2Q9H3Q3 398 aa13.98□□□□□ -0.17
EXOSC3-202ENST00000396521 PLEKHA1Q9HB21 404 aa13.98□□□□□ -0.17
EXOSC3-202ENST00000396521 GTF2A1LQ9UNN4 478 aa13.98□□□□□ -0.17
EXOSC3-202ENST00000396521 A0A1B0GTI1 187 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 OOSP1A8MZH6 123 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 MGST3O14880 152 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 SRSF10O75494 262 aaKnown RBP13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 CYB5AP00167 134 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 LPLP06858 475 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 CCL1P22362 96 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 CDC42P60953 191 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 MFGE8Q08431 387 aaPredicted RBP13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 EDDM3AQ14507 147 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 GRK1Q15835 563 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 ABCA11PQ4W5N1 156 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 CCDC144NLQ6NUI1 221 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 TCF23Q7RTU1 214 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 ABHD12Q8N2K0 398 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 OSR2Q8N2R0 312 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 LINC00482Q8N8I6 264 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 OR4P4Q8NGL7 312 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 C10orf35Q96D05 121 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 ASB9Q96DX5 294 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 SLC25A33Q9BSK2 321 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 PAPOLBQ9NRJ5 636 aaKnown RBP13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 MTCH1Q9NZJ7 389 aa13.97□□□□□ -0.17
EXOSC3-202ENST00000396521 FAM230AA0A1W2PPH8 454 aa13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 MRPL3P09001 348 aaKnown RBP13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 GABRR1P24046 479 aa13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 MNDAP41218 407 aa13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 GP2P55259 537 aaKnown RBP13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 KHDC1LQ5JSQ8 128 aa13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 SLC7A6OSQ96CW6 309 aaPredicted RBP13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 TAS2R3Q9NYW6 316 aa13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 TVP23BQ9NYZ1 205 aa13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 H2AFY2Q9P0M6 372 aaPredicted RBP13.96□□□□□ -0.17
EXOSC3-202ENST00000396521 TRGV10A0A0A0MS01 117 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 TMEM82A0PJX8 343 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 CCDC182A6NF36 153 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 HAND1O96004 215 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 CD34P28906 385 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 P2RX3P56373 397 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 CXCR4P61073 352 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 MS4A2Q01362 244 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 ZNF146Q15072 292 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 SPIN3Q5JUX0 258 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 HEPN1Q6WQI6 88 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 TRAPPC6BQ86SZ2 158 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 EMG1Q92979 244 aaKnown RBP13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 CADM1Q9BY67 442 aaKnown RBP13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 PCDHB16Q9NRJ7 776 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 ZFP57Q9NU63 452 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 HHLA2Q9UM44 414 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 COPS3Q9UNS2 423 aa13.95□□□□□ -0.18
EXOSC3-202ENST00000396521 AQP12BA6NM10 295 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 PRR32B1ATL7 298 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 ZNF670-ZNF695F2Z2N8 137 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 SYT7O43581 403 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 IGLV1-47P01700 117 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 FAM106CPP0CH98 169 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 JUNBP17275 347 aaPredicted RBP13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 PRRX1P54821 245 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 ZNF91Q05481 1191 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 GABPB1Q06547 395 aaPredicted RBP13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 SLC25A26Q70HW3 274 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 MEPCEQ7L2J0 689 aaKnown RBP13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 AQP12AQ8IXF9 295 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 MRPL41Q8IXM3 137 aaKnown RBP13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 BATF2Q8N1L9 274 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 COMMD1Q8N668 190 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 DNAAF1Q8NEP3 725 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 TRMT10AQ8TBZ6 339 aaKnown RBP13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 CORO2AQ92828 525 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 BORCS8Q96FH0 119 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 APOL4Q9BPW4 351 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 ADI1Q9BV57 179 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 CHST5Q9GZS9 411 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 CLN6Q9NWW5 311 aa13.94□□□□□ -0.18
EXOSC3-202ENST00000396521 TRBV2A0A0J9YWF9 115 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 MEX3AA1L020 520 aaKnown RBP13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 PSMB11A5LHX3 300 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 F8VVB4 439 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 F8VWA3 439 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 TOR1AO14656 332 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 RAMP3O60896 148 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 HOXD3P31249 432 aaPredicted RBP13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 THBS3P49746 956 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 RBP2P50120 134 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 CRISP1P54107 249 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 UBE2V2Q15819 145 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 TMEM236Q5W0B7 351 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 THNSL2Q86YJ6 484 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 SLC35F2Q8IXU6 374 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 ADGRG5Q8IZF4 528 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 FAM58AQ8N1B3 248 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 OR52N4Q8NGI2 321 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 CHPT1Q8WUD6 406 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 PP6455Q8WZ26 134 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 SLAMF9Q96A28 289 aa13.93□□□□□ -0.18
EXOSC3-202ENST00000396521 NRBF2Q96F24 287 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms