RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 FSCN3Q9NQT6 498 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 TMEM38BQ9NVV0 291 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 C7orf77A4D0Y5 90 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 NRASP01111 189 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 FGF5P12034 268 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 RNF212Q495C1 297 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 AKR7LQ8NHP1 331 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 SAP25Q8TEE9 199 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 IL36GQ9NZH8 169 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 C5orf52A6NGY3 159 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 HOXB1P14653 301 aaPredicted RBP13.59□□□□□ -0.23
HOXA3-202ENST00000396352 ZNF32P17041 273 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 CAMLGP49069 296 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 NOVA1P51513 510 aaKnown RBP13.59□□□□□ -0.23
HOXA3-202ENST00000396352 SSR4P51571 173 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 UCP3P55916 312 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 TGIF1Q15583 401 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 CDCP2Q5VXM1 449 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 FBXW12Q6X9E4 464 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 OR4D5Q8NGN0 318 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 RSRP1Q9BUV0 290 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 SF3B5Q9BWJ5 86 aaKnown RBP13.59□□□□□ -0.23
HOXA3-202ENST00000396352 BCO1Q9HAY6 547 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 SPACA1Q9HBV2 294 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 ST3GAL6Q9Y274 331 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 RCL1Q9Y2P8 373 aaKnown RBP13.59□□□□□ -0.23
HOXA3-202ENST00000396352 NSG1A0A0A6YYJ2 146 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 SNRNP70P08621 437 aaKnown RBP13.59□□□□□ -0.23
HOXA3-202ENST00000396352 B4GALT1P15291 398 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 B3GALT5-AS1P59052 145 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 S100A12P80511 92 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 LGI3Q8N145 548 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 TP53RKQ96S44 253 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 HS3ST3B1Q9Y662 390 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 FRYLO94915 3013 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 hCG_38984A0A1B0GV85 526 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 CCDC85CA6NKD9 419 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 KLF7O75840 302 aaPredicted RBP13.59□□□□□ -0.23
HOXA3-202ENST00000396352 AGAP20933 346 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 PDCD1Q15116 288 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 EXT1Q16394 746 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 SLC35G3Q8N808 338 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 EIF5A2Q9GZV4 153 aaKnown RBP13.59□□□□□ -0.23
HOXA3-202ENST00000396352 RGCCQ9H4X1 137 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 TUBA4BQ9H853 241 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 ZNF286AQ9HBT8 521 aa13.59□□□□□ -0.23
HOXA3-202ENST00000396352 C1orf196B1AJZ1 125 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 ST8SIA3O43173 380 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 PHF1O43189 567 aaPredicted RBP13.58□□□□□ -0.24
HOXA3-202ENST00000396352 MT-ND4LP03901 98 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 AADACP22760 399 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF468Q5VIY5 522 aaPredicted RBP13.58□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF100Q8IYN0 542 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 ISOC2Q96AB3 205 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 ALKBH3Q96Q83 286 aaPredicted RBP13.58□□□□□ -0.24
HOXA3-202ENST00000396352 TAAR9Q96RI9 348 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 C11orf1Q9H5F2 150 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 RAC3P60763 192 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 PSG4Q00888 419 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 HSD17B11Q8NBQ5 300 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 FGFBP3Q8TAT2 258 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 M1APQ8TC57 530 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 C20orf24Q9BUV8 137 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 FBXO9Q9UK97 447 aaPredicted RBP13.58□□□□□ -0.24
HOXA3-202ENST00000396352 PTRH2Q9Y3E5 179 aaKnown RBP13.58□□□□□ -0.24
HOXA3-202ENST00000396352 STRAPQ9Y3F4 350 aaKnown RBP13.58□□□□□ -0.24
HOXA3-202ENST00000396352 A6NLC8 198 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF716A6NP11 495 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 UBE2CO00762 179 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 PDCD6O75340 191 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 CBR3O75828 277 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 DAOP14920 347 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 HTR5AP47898 357 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 RAB5CP51148 216 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 ZNF92Q03936 586 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 BOD1Q96IK1 185 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 SYT3Q9BQG1 590 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 ATPIF1Q9UII2 106 aa13.58□□□□□ -0.24
HOXA3-202ENST00000396352 VPS13AQ96RL7 3174 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 A0A1W2PPE3 182 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 A0A1W2PPH5 198 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 MED19A0JLT2 244 aaPredicted RBP13.57□□□□□ -0.24
HOXA3-202ENST00000396352 TCN2P20062 427 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 RBM11P57052 281 aaKnown RBP13.57□□□□□ -0.24
HOXA3-202ENST00000396352 CPT1CQ8TCG5 803 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 WNT5BQ9H1J7 359 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 TMED3Q9Y3Q3 217 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 A0A0G2JMM0 328 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 A0A1W2PPB8 328 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 A0A1W2PRS3 328 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 KIR3DP1A8MWS1 328 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 DNPH1O43598 174 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 GLAP06280 429 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 GGNQ86UU5 652 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 UBE2ZQ9H832 354 aaPredicted RBP13.57□□□□□ -0.24
HOXA3-202ENST00000396352 CNTRLQ7Z7A1 2325 aa13.57□□□□□ -0.24
HOXA3-202ENST00000396352 FREM2Q5SZK8 3169 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 UMAD1C9J7I0 102 aa13.56□□□□□ -0.24
HOXA3-202ENST00000396352 PRSS44E7EML9 344 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms