RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 SOCS1O15524 211 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 KNG1P01042 644 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 LPLP06858 475 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 GSTT2BP0CG30 244 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 IL7P13232 177 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 ZNF44P15621 663 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 FUT3P21217 361 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 ERVK11-1P61568 191 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 SRSF1Q07955 248 aaKnown RBP eCLIP13.02□□□□□ -0.33
VAMP1-202ENST00000396308 RBM39Q14498 530 aaKnown RBP13.02□□□□□ -0.33
VAMP1-202ENST00000396308 MST1LQ2TV78 715 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 MOGAT2Q3SYC2 334 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 CDNFQ49AH0 187 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 RNASE12Q5GAN4 147 aaKnown RBP13.02□□□□□ -0.33
VAMP1-202ENST00000396308 ZNF57Q68EA5 555 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-202ENST00000396308 CLEC18BQ6UXF7 455 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 DTX2Q86UW9 622 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 BOLLQ8N9W6 283 aaKnown RBP13.02□□□□□ -0.33
VAMP1-202ENST00000396308 CLEC18CQ8NCF0 446 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 ABHD1Q96SE0 405 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 CLEC4MQ9H2X3 399 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-202ENST00000396308 GCM1Q9NP62 436 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 IFT46Q9NQC8 304 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 TAS2R8Q9NYW2 309 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 HSF4Q9ULV5 492 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 RAI1Q7Z5J4 1906 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-202ENST00000396308 A0A0A6YYD4 124 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 ISPDA4D126 451 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 TMEM235A6NFC5 223 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 SRRM5B3KS81 715 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 DEGS1O15121 323 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 HLA-DQB1P01920 261 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 CD3GP09693 182 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 GNB3P16520 340 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 CBX5P45973 191 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 SSBP1Q04837 148 aaKnown RBP13.01□□□□□ -0.33
VAMP1-202ENST00000396308 HFEQ30201 348 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 ACP7Q6ZNF0 438 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 C11orf53Q8IXP5 236 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 NEU4Q8WWR8 484 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-202ENST00000396308 ARHGAP5-AS1Q96IT6 56 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 THAP7Q9BT49 309 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-202ENST00000396308 TRAF4Q9BUZ4 470 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-202ENST00000396308 CACNG6Q9BXT2 260 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 PECRQ9BY49 303 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 HES4Q9HCC6 221 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.01□□□□□ -0.33
VAMP1-202ENST00000396308 OR14J1Q9UGF5 321 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 PLEKHA6Q9Y2H5 1048 aa13.01□□□□□ -0.33
VAMP1-202ENST00000396308 IGHV1-69-2A0A0G2JMI3 117 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 CENPXA8MT69 81 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 MCRIP1C9JLW8 97 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 MFNGO00587 321 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 CA11O75493 328 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 RBBP9O75884 186 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 ECDO95905 644 aaPredicted RBP13□□□□□ -0.33
VAMP1-202ENST00000396308 CHATP28329 748 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 DGCR2P98153 550 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 ZNF260Q3ZCT1 412 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 SP5Q6BEB4 398 aaPredicted RBP13□□□□□ -0.33
VAMP1-202ENST00000396308 TRAPPC6BQ86SZ2 158 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 BIVMQ86UB2 503 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 TOMM5Q8N4H5 51 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 IFT22Q9H7X7 185 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 ZMAT3Q9HA38 289 aaKnown RBP13□□□□□ -0.33
VAMP1-202ENST00000396308 NLKQ9UBE8 527 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 LAMP3Q9UQV4 416 aa13□□□□□ -0.33
VAMP1-202ENST00000396308 A0A1W2PQ09 198 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 NKX6-3A6NJ46 265 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 F8VVB4 439 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 F8VWA3 439 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 CLDN1O95832 211 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 HAND1O96004 215 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 GLAP06280 429 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 CSF1P09603 554 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 CSF3P09919 207 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 DANCRP0C864 163 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 RCVRNP35243 200 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 FAUP35544 74 aaKnown RBP12.99□□□□□ -0.33
VAMP1-202ENST00000396308 MDH2P40926 338 aaKnown RBP12.99□□□□□ -0.33
VAMP1-202ENST00000396308 PMELP40967 661 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 ZNF146Q15072 292 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 KCNJ8Q15842 424 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 MICBQ29980 383 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 PAN3Q58A45 887 aaKnown RBP12.99□□□□□ -0.33
VAMP1-202ENST00000396308 C11orf71Q6IPW1 123 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 C6orf201Q7Z4U5 140 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 PEG10Q86TG7 708 aaKnown RBP12.99□□□□□ -0.33
VAMP1-202ENST00000396308 ZCCHC24Q8N2G6 241 aaKnown RBP12.99□□□□□ -0.33
VAMP1-202ENST00000396308 OR52I2Q8NH67 350 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 PPP1R35Q8TAP8 253 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 SETD6Q8TBK2 473 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 COX4I2Q96KJ9 171 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 CHMP1AQ9HD42 196 aaPredicted RBP12.99□□□□□ -0.33
VAMP1-202ENST00000396308 WIPI2Q9Y4P8 454 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 DOPEY1Q5JWR5 2465 aa12.99□□□□□ -0.33
VAMP1-202ENST00000396308 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
VAMP1-202ENST00000396308 TRAV38-1A0A0B4J264 116 aa12.98□□□□□ -0.33
VAMP1-202ENST00000396308 FOXI3A8MTJ6 420 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-202ENST00000396308 H7C1Q1 480 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms