RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TGFBR1P36897 503 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 HIST1H3AP68431 136 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SKP2Q13309 424 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SPINK14Q6IE38 97 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM92Q6UXU6 159 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF429Q86V71 674 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 OR2Y1Q8NGV0 311 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 PTP4A1Q93096 173 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 NAA60Q9H7X0 242 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 TRAPPC1Q9Y5R8 145 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ACP1P24666 158 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 CTGFP29279 349 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF528Q3MIS6 628 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 PABPC1L2AQ5JQF8 200 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 OR2T2Q6IF00 324 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 PWWP2BQ6NUJ5 590 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF774Q6NX45 483 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM88Q6PEY1 159 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 PRSS41Q7RTY9 318 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 CLRN3Q8NCR9 226 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 OR52L2PQ8NGH6 319 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 RNF2Q99496 336 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TINAGL1Q9GZM7 467 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TRDCB7Z8K6 153 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 RGS13O14921 159 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 OR3A4PP47883 348 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM267Q0VDI3 215 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 NKG7Q16617 165 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 MOGAT2Q3SYC2 334 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 ANKRD34AQ69YU3 496 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 XAF1Q6GPH4 301 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 CMBLQ96DG6 245 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 RASL10BQ96S79 203 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 NXF2Q9GZY0 626 aaKnown RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 PLA2G3Q9NZ20 509 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 LYZL6O75951 148 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 SFT2D2O95562 160 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 IGHA1P01876 353 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 INHBBP09529 407 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 SURF2Q15527 256 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 GUK1Q16774 197 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 ACSM6Q6P461 480 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 MRGPREQ86SM8 312 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 RND1Q92730 232 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TGIF2Q9GZN2 237 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 C1RLQ9NZP8 487 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 LPAR3Q9UBY5 353 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 SCN10AQ9Y5Y9 1956 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 MBPP02686 304 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 CST2P09228 141 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 SFTA3P0C7M3 94 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 CDKN2AP42771 156 aaKnown RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 SLC37A1P57057 533 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 NXPH1P58417 271 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM241Q24JQ0 296 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM97Q5BJF2 176 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 C6orf201Q7Z4U5 140 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 OR5R1Q8NH85 324 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 ANAPC16Q96DE5 110 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 PERPQ96FX8 193 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TSPAN32Q96QS1 320 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 CRISPLD2Q9H0B8 497 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 PLEKHB1Q9UF11 243 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TCFL5Q9UL49 500 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 GZMHP20718 246 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 CD200P41217 278 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 GNG10P50151 68 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 FMODQ06828 376 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 AANATQ16613 207 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF770Q6IQ21 691 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 PECRQ9BY49 303 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF768Q9H5H4 540 aaKnown RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM167BQ9NRX6 74 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 MMP24Q9Y5R2 645 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 FAM186AA6NE01 2351 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 SP1P08047 785 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 MPGP29372 298 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 SPEM2Q0P670 501 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 COL19A1Q14993 1142 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 FAM103A1Q9BTL3 118 aaKnown RBP4.84□□□□□ -1.63
VPS13C-204ENST00000395898 WDR54Q9H977 334 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 PIPOXQ9P0Z9 390 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 APC2O95996 2303 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 LRRC37AA6NMS7 1700 aa4.84□□□□□ -1.63
VPS13C-204ENST00000395898 ANKRD20A5PA0PJZ0 165 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 DNASE2O00115 360 aaPredicted RBP4.84□□□□□ -1.64
VPS13C-204ENST00000395898 FCGR3BO75015 233 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 SLC25A5P05141 298 aaKnown RBP4.84□□□□□ -1.64
VPS13C-204ENST00000395898 CD96P40200 585 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 PMP22Q01453 160 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 SP6Q3SY56 376 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 ETV3LQ6ZN32 361 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 D2HGDHQ8N465 521 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 OR2C3Q8N628 320 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 VSTM2LQ96N03 204 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 SLC38A11Q08AI6 406 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 ISXQ2M1V0 245 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 OR8B12Q8NGG6 310 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 RPS4Y2Q8TD47 263 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 PIK3IP1Q96FE7 263 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms