RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 IGHA1P01876 353 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 PRR23D2P0DMB1 279 aaPredicted RBP12.52□□□□□ -0.41
SNCA-205ENST00000394991 BRS3P32247 399 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 MYCNOSP40205 109 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 IL24Q13007 206 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 KLHL22Q53GT1 634 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 LCN1P1Q5VSP4 162 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 CD300LDQ6UXZ3 194 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 OR52N4Q8NGI2 321 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 MUC7Q8TAX7 377 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 STMN2Q93045 179 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 SNX22Q96L94 193 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 TTTY10Q9BZA0 68 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 PKIBQ9C010 78 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 ZNF556Q9HAH1 456 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 LAMP5Q9UJQ1 280 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 A6NIN4 97 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 NUDT19A8MXV4 375 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 DLGAP1O14490 977 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 PRODHO43272 600 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 RAMP3O60896 148 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 ZFPL1O95159 310 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 IGLV1-47P01700 117 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 SNRNP70P08621 437 aaKnown RBP12.51□□□□□ -0.41
SNCA-205ENST00000394991 SLC2A5P22732 501 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 LUMP51884 338 aaPredicted RBP12.51□□□□□ -0.41
SNCA-205ENST00000394991 BDH1Q02338 343 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 PRAMEF5Q5TYX0 476 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 DEGS2Q6QHC5 323 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 ZBTB49Q6ZSB9 765 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 CPOQ8IVL8 374 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 ABHD12Q8N2K0 398 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 KLHL30-AS1Q8NEE0 82 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 TRMT10AQ8TBZ6 339 aaKnown RBP12.51□□□□□ -0.41
SNCA-205ENST00000394991 NOL4LQ96MY1 436 aaPredicted RBP12.51□□□□□ -0.41
SNCA-205ENST00000394991 CHST6Q9GZX3 395 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 MTCH1Q9NZJ7 389 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 IL36RNQ9UBH0 155 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 ZMAT5Q9UDW3 170 aaKnown RBP12.51□□□□□ -0.41
SNCA-205ENST00000394991 COPS3Q9UNS2 423 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 V9GYS6 101 aa12.51□□□□□ -0.41
SNCA-205ENST00000394991 SORL1Q92673 2214 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 A0A1B0GTI1 187 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 FAM172BPA6NC97 362 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 PSPNO60542 156 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 SRSF10O75494 262 aaKnown RBP12.5□□□□□ -0.41
SNCA-205ENST00000394991 CIB2O75838 187 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 ANXA8P13928 327 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 GDNFP39905 211 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 OR3A4PP47883 348 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 ESRRGP62508 458 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 GINS1Q14691 196 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 GRK1Q15835 563 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 OR14K1Q8NGZ2 314 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 SLAMF9Q96A28 289 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 CEP19Q96LK0 163 aa12.5□□□□□ -0.41
SNCA-205ENST00000394991 IGKV1-27A0A075B6S5 117 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 INMTO95050 263 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 MRPL3P09001 348 aaKnown RBP12.49□□□□□ -0.41
SNCA-205ENST00000394991 OSMP13725 252 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 SLC6A1P30531 599 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 RPS7P62081 194 aaKnown RBP12.49□□□□□ -0.41
SNCA-205ENST00000394991 ROM1Q03395 351 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 SNAPC1Q16533 368 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 ZNF829Q3KNS6 432 aaPredicted RBP12.49□□□□□ -0.41
SNCA-205ENST00000394991 SLC35D3Q5M8T2 416 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 TPTE2P1Q5T6R2 138 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 KCTD18Q6PI47 426 aaPredicted RBP12.49□□□□□ -0.41
SNCA-205ENST00000394991 Q6ZSR3 168 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 RAX2Q96IS3 184 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 MROQ9BYG7 248 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 YIPF3Q9GZM5 350 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 ZNF286AQ9HBT8 521 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 PAPOLBQ9NRJ5 636 aaKnown RBP12.49□□□□□ -0.41
SNCA-205ENST00000394991 MOB4Q9Y3A3 225 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 HSPE1-MOB4S4R3N1 261 aa12.49□□□□□ -0.41
SNCA-205ENST00000394991 LYSTQ99698 3801 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 LCE6AA0A183 80 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 FAM230AA0A1W2PPH8 454 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 LEUTXA8MZ59 168 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 LY6LH3BQJ8 138 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 M0QZK8 103 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 HAND1O96004 215 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 PEX2P28328 305 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 ARHGDIBP52566 201 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 RIDAP52758 137 aaKnown RBP12.48□□□□□ -0.41
SNCA-205ENST00000394991 ZNF91Q05481 1191 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 UTF1Q5T230 341 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 TRAPPC6BQ86SZ2 158 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 RTN4RL2Q86UN3 420 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 ZNF679Q8IYX0 411 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 ZNF596Q8TC21 504 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 UTP4Q969X6 686 aaKnown RBP12.48□□□□□ -0.41
SNCA-205ENST00000394991 ZFP57Q9NU63 452 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 LINC00527Q9UJ94 153 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.48□□□□□ -0.41
SNCA-205ENST00000394991 GTF2A1LQ9UNN4 478 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 AP4S1Q9Y587 144 aa12.48□□□□□ -0.41
SNCA-205ENST00000394991 CCDC182A6NF36 153 aa12.47□□□□□ -0.41
SNCA-205ENST00000394991 MAGEB4O15481 346 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms