RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 SEBOXQ9HB31 216 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-202ENST00000393773 HHLA2Q9UM44 414 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 H3BUI4 141 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 CCDC159P0C7I6 412 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 PEX2P28328 305 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 BRS3P32247 399 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 OR3A1P47881 315 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 THBS3P49746 956 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 P2RX3P56373 397 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 CXCR4P61073 352 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 UBE2V2Q15819 145 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 SLC25A26Q70HW3 274 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 ARHGAP24Q8N264 748 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 CAPSLQ8WWF8 208 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 EMG1Q92979 244 aaKnown RBP12.2□□□□□ -0.46
CHMP3-202ENST00000393773 ZNF649Q9BS31 505 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 CHID1Q9BWS9 393 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 DPM3Q9P2X0 92 aa12.2□□□□□ -0.46
CHMP3-202ENST00000393773 MRM2Q9UI43 246 aaKnown RBP12.2□□□□□ -0.46
CHMP3-202ENST00000393773 UBE2J1Q9Y385 318 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-202ENST00000393773 FAM172BPA6NC97 362 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 GABRR1P24046 479 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 GDNFP39905 211 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 RPL23AP62750 156 aaKnown RBP12.19□□□□□ -0.46
CHMP3-202ENST00000393773 DCTN2Q13561 401 aaKnown RBP12.19□□□□□ -0.46
CHMP3-202ENST00000393773 SLC35F2Q8IXU6 374 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 ABHD12Q8N2K0 398 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 OR51D1Q8NGF3 324 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 ZNF596Q8TC21 504 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 ASB9Q96DX5 294 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 CHST5Q9GZS9 411 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 PLEKHA1Q9HB21 404 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 ZNF286AQ9HBT8 521 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 ADGRL4Q9HBW9 690 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 RBFOX1Q9NWB1 397 aaKnown RBP12.19□□□□□ -0.46
CHMP3-202ENST00000393773 TVP23BQ9NYZ1 205 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 SNX5Q9Y5X3 404 aa12.19□□□□□ -0.46
CHMP3-202ENST00000393773 BIRC6Q9NR09 4857 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 PSMB11A5LHX3 300 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 H0YHG0 523 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 MGST3O14880 152 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 PRKYO43930 277 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 ENTPD6O75354 484 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 INMTO95050 263 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 CD34P28906 385 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 ERP29P30040 261 aaKnown RBP12.18□□□□□ -0.46
CHMP3-202ENST00000393773 ZNF146Q15072 292 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 SNAPC1Q16533 368 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 HLA-DRB5Q30154 266 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 SLX4IPQ5VYV7 408 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 HEPN1Q6WQI6 88 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 C18orf65Q6ZTR6 163 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 SSX6Q7RTT6 188 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 RNF144BQ7Z419 303 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 TRAPPC6BQ86SZ2 158 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 RTN4RL2Q86UN3 420 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 EGFL6Q8IUX8 553 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 Q8IYB0 196 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 MCRIP2Q9BUT9 160 aaKnown RBP12.18□□□□□ -0.46
CHMP3-202ENST00000393773 ZNF556Q9HAH1 456 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 SLC7A11Q9UPY5 501 aa12.18□□□□□ -0.46
CHMP3-202ENST00000393773 TRBV2A0A0J9YWF9 115 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 LY6LH3BQJ8 138 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 H3BSH0 61 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 M0QZK8 103 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 M0R129 80 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 GATBO75879 557 aaKnown RBP12.17□□□□□ -0.46
CHMP3-202ENST00000393773 ANXA8P13928 327 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 PRKACGP22612 351 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 CDK2P24941 298 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 DUSP1P28562 367 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 NPBWR2P48146 333 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 FUT6P51993 359 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 ARHGDIBP52566 201 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 ODF4Q2M2E3 257 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 SPIN3Q5JUX0 258 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 NKAPLQ5M9Q1 402 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 UTF1Q5T230 341 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 TPTE2P1Q5T6R2 138 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 OR52W1Q6IF63 320 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 C8orf86Q6ZUL3 223 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 OR2W3Q7Z3T1 314 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 BCDIN3DQ7Z5W3 292 aaKnown RBP12.17□□□□□ -0.46
CHMP3-202ENST00000393773 CATSPERDQ86XM0 798 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 ENTHD1Q8IYW4 607 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 STMN2Q93045 179 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 CCDC124Q96CT7 223 aaKnown RBP12.17□□□□□ -0.46
CHMP3-202ENST00000393773 P2RX4Q99571 388 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 MNTQ99583 582 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 TEX12Q9BXU0 123 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 GAL3ST2Q9H3Q3 398 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 ARL2BPQ9Y2Y0 163 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 MOB4Q9Y3A3 225 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 HSPE1-MOB4S4R3N1 261 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 U3KQK5 164 aa12.17□□□□□ -0.46
CHMP3-202ENST00000393773 LEUTXA8MZ59 168 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 B2RBV5 119 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 BUB1B-PAK6H3BSN5 160 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 DCTN3O75935 186 aa12.16□□□□□ -0.46
CHMP3-202ENST00000393773 BCL3P20749 454 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms