RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ZNF260Q3ZCT1 412 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 PLXDC2Q6UX71 529 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ARRDC1Q8N5I2 433 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ZDHHC22Q8N966 263 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 OR13C8Q8NGS7 320 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ABHD3Q8WU67 409 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 VPS25Q9BRG1 176 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 HDHD3Q9BSH5 251 aaPredicted RBP9.25□□□□□ -0.93
CALD1-203ENST00000393118 TRAPPC2LH3BP13 241 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 EFNA2O43921 213 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ISG15P05161 165 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 MMP7P09237 267 aaPredicted RBP9.25□□□□□ -0.93
CALD1-203ENST00000393118 MUC1P15941 1255 aaPredicted RBP9.25□□□□□ -0.93
CALD1-203ENST00000393118 P2RY4P51582 365 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ZNF385CQ66K41 422 aaPredicted RBP9.25□□□□□ -0.93
CALD1-203ENST00000393118 FBXW12Q6X9E4 464 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 C1orf210Q8IVY1 113 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 ZNF441Q8N8Z8 693 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 NRIP2Q9BQI9 281 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 DEFB127Q9H1M4 99 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 SIRT7Q9NRC8 400 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 PIPOXQ9P0Z9 390 aa9.25□□□□□ -0.93
CALD1-203ENST00000393118 SHISA7A6NL88 538 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 FCGR2CP31995 323 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 GSK3AP49840 483 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 ZNF133P52736 654 aaPredicted RBP9.24□□□□□ -0.93
CALD1-203ENST00000393118 PKIAP61925 76 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 C1orf100Q5SVJ3 147 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 DHRS7BQ6IAN0 325 aaPredicted RBP9.24□□□□□ -0.93
CALD1-203ENST00000393118 OR1J1Q8NGS3 322 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 HIST1H2BAQ96A08 127 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 CPNE4Q96A23 557 aaPredicted RBP9.24□□□□□ -0.93
CALD1-203ENST00000393118 OCSTAMPQ9BR26 566 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 LPAR5Q9H1C0 372 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 LUZP4Q9P127 313 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 AMDHD2Q9Y303 409 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 FLVCR1Q9Y5Y0 555 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 HLA-HP01893 362 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 UBE2NP61088 152 aaKnown RBP9.24□□□□□ -0.93
CALD1-203ENST00000393118 UNC119Q13432 240 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 MPPED2Q15777 294 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 RTL6Q6ICC9 239 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 OR5AS1Q8N127 324 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 CNEP1R1Q8N9A8 125 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 PILRBQ9UKJ0 227 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 TCFL5Q9UL49 500 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 ROS1P08922 2347 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 ANKRD30BLA7E2S9 258 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 XRCC2O43543 280 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 DUS4LO95620 317 aaKnown RBP9.24□□□□□ -0.93
CALD1-203ENST00000393118 TK1P04183 234 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 ITGB2P05107 769 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 SELLP14151 372 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 FGF7P21781 194 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 PIGPP57054 158 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 PCOLCEQ15113 449 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 CLEC12BQ2HXU8 276 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 GGNBP1Q5YKI7 109 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 CCDC71LQ8N9Z2 235 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 MITD1Q8WV92 249 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 DYRK2Q92630 601 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 EMG1Q92979 244 aaKnown RBP9.24□□□□□ -0.93
CALD1-203ENST00000393118 NECAP2Q9NVZ3 263 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 GAB2Q9UQC2 676 aa9.24□□□□□ -0.93
CALD1-203ENST00000393118 K7ESF4 209 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 RAC3P60763 192 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 SPCS3P61009 180 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 HABP2Q14520 560 aaPredicted RBP9.23□□□□□ -0.93
CALD1-203ENST00000393118 ZNF239Q16600 458 aaKnown RBP9.23□□□□□ -0.93
CALD1-203ENST00000393118 SLC25A47Q6Q0C1 308 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 DHRS13Q6UX07 377 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 IL34Q6ZMJ4 242 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 REC114Q7Z4M0 266 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 SLC25A42Q86VD7 318 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 B3GAT1Q9P2W7 334 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 IGHV1-45A0A0A0MS14 117 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 SERPINE3A8MV23 424 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 IGHMP01871 453 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 MPLP40238 635 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 LSM6P62312 80 aaKnown RBP9.23□□□□□ -0.93
CALD1-203ENST00000393118 RAB32Q13637 225 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 CLEC18BQ6UXF7 455 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 SLC36A1Q7Z2H8 476 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 RPS4Y2Q8TD47 263 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 RDH5Q92781 318 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 APH1AQ96BI3 265 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 TMEM68Q96MH6 324 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 FAM212BQ9NTI7 297 aaPredicted RBP9.23□□□□□ -0.93
CALD1-203ENST00000393118 NUDT19A8MXV4 375 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 HS3ST1O14792 307 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 GNG10P50151 68 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 PNLIPRP3Q17RR3 467 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 DRAM2Q6UX65 266 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 CT55Q8WUE5 264 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 HAS2Q92819 552 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 GPR61Q9BZJ8 451 aa9.23□□□□□ -0.93
CALD1-203ENST00000393118 ACTL6AO96019 429 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 RAB4AP20338 218 aa9.22□□□□□ -0.93
CALD1-203ENST00000393118 SRD5A2P31213 254 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms