RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 TMEM210A6NLX4 147 aa9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 OR7C1O76099 320 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 MRPS15P82914 257 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 ATPAF1Q5TC12 328 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 OR5AP2Q8NGF4 316 aa9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 CCDC107Q8WV48 283 aa9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 CMSS1Q9BQ75 279 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 TRAF4Q9BUZ4 470 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 TMEM100Q9NV29 134 aa9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF701Q9NV72 531 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF230Q9UIE0 474 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 SH3BGRL2Q9UJC5 107 aa9.76□□□□□ -0.85
SMARCAL1-203ENST00000392128 DSPP15924 2871 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 MAP1BP46821 2468 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 H3BUI4 141 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 M0R1B8 84 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 GCH1P30793 250 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 CCKARP32238 428 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 OR8G1Q15617 311 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 BATF2Q8N1L9 274 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 RELL2Q8NC24 303 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZCCHC14Q8WYQ9 949 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 VKORC1Q9BQB6 163 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 HDHD3Q9BSH5 251 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 RCC2Q9P258 522 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF69Q9UC07 566 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 POLDIP2Q9Y2S7 368 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 TLN1Q9Y490 2541 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 A0A1B0GWJ7 208 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 OR2AT4A6NND4 320 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 TIMM8AO60220 97 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 CRYAAP02489 173 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 FCGR3AP08637 254 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 ANXA3P12429 323 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 CXCL3P19876 107 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 B2MP61769 119 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 IL13RA2Q14627 380 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 TMEM211Q6ICI0 200 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 RGS7BPQ6MZT1 257 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 LIX1LQ8IVB5 337 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 SCCPDHQ8NBX0 429 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 HS3ST6Q96QI5 342 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 DMRTA2Q96SC8 542 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 VSIG4Q9Y279 399 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 SPEF1Q9Y4P9 236 aa9.75□□□□□ -0.85
SMARCAL1-203ENST00000392128 PIEZO1Q92508 2521 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 MEIKINA0A087WXM9 373 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 UBE2QL1A1L167 161 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 CEACAM18A8MTB9 384 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 C16orf97H3BN30 126 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 MLNRO43193 412 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 RHBDL1O75783 438 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 C1QBP02746 253 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 PRKACAP17612 351 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 OR3A3P47888 321 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 NKX2-5P52952 324 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF154Q13106 437 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 CHRFAM7AQ494W8 412 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 C6orf183Q5T699 404 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 OVCH2Q7RTZ1 564 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 NOXA1Q86UR1 476 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 TMEM17Q86X19 198 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 Q8IYB0 196 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 FAM58AQ8N1B3 248 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 SPICQ8N5J4 248 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 TERB2Q8NHR7 220 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 MAFIPQ8WZ33 124 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 RND1Q92730 232 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 ANXA10Q9UJ72 324 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 NPTNQ9Y639 398 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 H0YL77 283 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 ACAA1P09110 424 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 OR4E1P0C645 316 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 BTF3P20290 206 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 FABP6P51161 128 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 NKX6-1P78426 367 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 PDCD1Q15116 288 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 BRICD5Q6PL45 260 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 FIP1L1Q6UN15 594 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 SSX8Q7RTT4 187 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 TMED4Q7Z7H5 227 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 LHFPL1Q86WI0 220 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 OR52B4Q8NGK2 314 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 PPA2Q9H2U2 334 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 PRORYQ9H606 182 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF442Q9H7R0 627 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 IFT22Q9H7X7 185 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 SPACA1Q9HBV2 294 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 C12orf4Q9NQ89 552 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 IL36RNQ9UBH0 155 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF222Q9UK12 451 aa9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 RP1L1Q8IWN7 2480 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-203ENST00000392128 IGKV1D-8A0A087WSZ0 117 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 ZNF250P15622 560 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 GLRXP35754 106 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 ERVK11-1P61568 191 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 TSPAN5P62079 268 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 CDK10Q15131 360 aa9.73□□□□□ -0.85
SMARCAL1-203ENST00000392128 GRK1Q15835 563 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms