RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 CXorf66Q5JRM2 361 aaPredicted RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 SLC25A45Q8N413 288 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 CYB561D1Q8N8Q1 229 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 HAS2Q92819 552 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 ALKBH3Q96Q83 286 aaPredicted RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 TMPRSS5Q9H3S3 457 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 SLC2A9Q9NRM0 540 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF107Q9UII5 783 aaPredicted RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 TINAGQ9UJW2 476 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 RBM7Q9Y580 266 aaKnown RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 TIMM10BQ9Y5J6 103 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 BLACEA4D250 179 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 FIGNL2A6NMB9 653 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 E5RGE8 158 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 SCAF4O95104 1147 aaKnown RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 APOBEC1P41238 236 aaKnown RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 RPS23P62266 143 aaKnown RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 PYY3Q5JQD4 70 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF600Q6ZNG1 722 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF695Q8IW36 515 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 OR5C1Q8NGR4 320 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 SHDQ96IW2 340 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 DEFB126Q9BYW3 111 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 NSG2Q9Y328 171 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF705GA8MUZ8 300 aaPredicted RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 NUDT19A8MXV4 375 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 H3BQ15 152 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 MRPS34P82930 218 aaKnown RBP12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 C10orf91Q5T1B1 145 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 LYPD6Q86Y78 171 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 SLC35G3Q8N808 338 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 OR51H1Q8NH63 302 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 RAB39BQ96DA2 213 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 LYZL4Q96KX0 146 aa12.69□□□□□ -0.38
LRRFIP1-204ENST00000392000 TRAV39A0A0B4J263 110 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 ATP6V0CP27449 155 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 RPL23AP62750 156 aaKnown RBP12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 NKX6-1P78426 367 aaPredicted RBP12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 IL1F10Q8WWZ1 152 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 INTS12Q96CB8 462 aaKnown RBP12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 ALKBH4Q9NXW9 302 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 DSPP15924 2871 aaKnown RBP12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 SPTBN2O15020 2390 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 CCL2P13500 99 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 B4GALT1P15291 398 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 BMP5P22003 454 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 RHEBQ15382 184 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 OR2T2Q6IF00 324 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF880Q6PDB4 577 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 CA5BP1Q8WTZ4 195 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 POM121Q96HA1 1249 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 GAR1Q9NY12 217 aaKnown RBP12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 ST3GAL6Q9Y274 331 aa12.68□□□□□ -0.38
LRRFIP1-204ENST00000392000 ANKUB1A6NFN9 424 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 UBE2CO00762 179 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 PHOX2AO14813 284 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 PIAS2O75928 621 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 IFI6P09912 130 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 HAAOP46952 286 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 DLK1P80370 383 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 MPV17LQ2QL34 196 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 PHYHD1Q5SRE7 291 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 SSX9Q7RTT3 188 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 ANKRD37Q7Z713 158 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 GPR137CQ8N3F9 429 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 ULBP2Q9BZM5 246 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 A0A1W2PQD3 144 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 TERTO14746 1132 aaKnown RBP12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 SCRG1O75711 98 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 CNOT4O95628 575 aaKnown RBP12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 CXCL1P09341 107 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 PGA4P0DJD7 388 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 PGA3P0DJD8 388 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 AKR1C8PQ5T2L2 129 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF774Q6NX45 483 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 POC1BQ8TC44 478 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF501Q96CX3 271 aaPredicted RBP12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 SNX22Q96L94 193 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 WFIKKN1Q96NZ8 548 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF318Q5VUA4 2279 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 POLEQ07864 2286 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 A0A1W2PR77 199 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 RAB5CP51148 216 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF154Q13106 437 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF429Q86V71 674 aa12.67□□□□□ -0.38
LRRFIP1-204ENST00000392000 TRAF3IP2O43734 574 aaPredicted RBP12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 HEXAP06865 529 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 NKX2-1P43699 371 aaPredicted RBP12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 ZNF239Q16600 458 aaKnown RBP12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 LHFPL1Q86WI0 220 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 NTNG2Q96CW9 530 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 TP53RKQ96S44 253 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 NAA60Q9H7X0 242 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 PPP1R2P9O14990 202 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 DANCRP0C864 163 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 AGAP20933 346 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 RND3P61587 244 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 GAMTQ14353 236 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms