RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 IL19Q9UHD0 177 aa22.67■■□□□ 1.22
MSX1-201ENST00000382723 HSF4Q9ULV5 492 aa22.67■■□□□ 1.22
MSX1-201ENST00000382723 C17orf100A8MU93 164 aa22.66■■□□□ 1.22
MSX1-201ENST00000382723 SERPINE3A8MV23 424 aa22.66■■□□□ 1.22
MSX1-201ENST00000382723 MT-ND4P03905 459 aa22.66■■□□□ 1.22
MSX1-201ENST00000382723 ACTBP60709 375 aa22.66■■□□□ 1.22
MSX1-201ENST00000382723 ACTG1P63261 375 aa22.66■■□□□ 1.22
MSX1-201ENST00000382723 ARL6IP1Q15041 203 aa22.66■■□□□ 1.22
MSX1-201ENST00000382723 LRRC29Q8WV35 223 aa22.66■■□□□ 1.22
MSX1-201ENST00000382723 FN3KRPQ9HA64 309 aa22.66■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A10PA6NDY2 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A18PA6NE21 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A16PA6NEW6 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A20PA6NIJ5 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A8PA6NJQ4 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A7PA6NKC0 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A22PA8MWA6 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A12PA8MX19 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A5PA8MXJ8 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A23PA8MXZ1 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 NOS1APO75052 506 aaPredicted RBP22.65■■□□□ 1.22
MSX1-201ENST00000382723 ACAA1P09110 424 aaPredicted RBP22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A15PP0C7V4 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A13PP0C7W8 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A14PP0C7W9 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM90A24PP0C7X0 464 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FUT3P21217 361 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 CCL8P80075 99 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 MINDY2Q8NBR6 621 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 DYRK2Q92630 601 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 DYNLRB1Q9NP97 96 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 IFT46Q9NQC8 304 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 UBE2QL1A1L167 161 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 CENPXA8MT69 81 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 TPD52L2O43399 206 aaKnown RBP22.65■■□□□ 1.22
MSX1-201ENST00000382723 CSF1P09603 554 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 DYRK1AQ13627 763 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 MPV17LQ2QL34 196 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 MST1LQ2TV78 715 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 FAM222BQ8WU58 562 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 POM121Q96HA1 1249 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 HRASLSQ9HDD0 168 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 TAS2R8Q9NYW2 309 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 AK3Q9UIJ7 227 aa22.65■■□□□ 1.22
MSX1-201ENST00000382723 hCG_2014768A0A024R1R8 64 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 B9A039 149 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 HSPB6O14558 160 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 GLRA1P23415 457 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 PMELP40967 661 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 SSBP1Q04837 148 aaKnown RBP22.64■■□□□ 1.21
MSX1-201ENST00000382723 EFNB3Q15768 340 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 FAAP20Q6NZ36 180 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 Q6ZNX1 250 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 ENKURQ8TC29 256 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 DIRC2Q96SL1 478 aa22.64■■□□□ 1.21
MSX1-201ENST00000382723 HDHD3Q9BSH5 251 aaPredicted RBP22.64■■□□□ 1.21
MSX1-201ENST00000382723 PRSS44E7EML9 344 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 IL13RA2Q14627 380 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 CCBE1Q6UXH8 406 aaPredicted RBP22.63■■□□□ 1.21
MSX1-201ENST00000382723 LINC00596Q86U02 117 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 GLCCI1Q86VQ1 547 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 MUC15Q8N387 334 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 BOLLQ8N9W6 283 aaKnown RBP22.63■■□□□ 1.21
MSX1-201ENST00000382723 HES4Q9HCC6 221 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 TREM2Q9NZC2 230 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 SPTBN1Q01082 2364 aaKnown RBP22.63■■□□□ 1.21
MSX1-201ENST00000382723 HS3ST1O14792 307 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 IGFBP2P18065 325 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 HLA-DMAP28067 261 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 C11orf91Q3C1V1 193 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 OR4S1Q8NGB4 309 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 GCM1Q9NP62 436 aa22.63■■□□□ 1.21
MSX1-201ENST00000382723 ICE1Q9Y2F5 2266 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 FAM240BA0A1B0GVZ2 78 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 CD3DP04234 171 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 ZNF44P15621 663 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 RCVRNP35243 200 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 GATA4P43694 442 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 FBXW5Q969U6 566 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 MCUBQ9NWR8 336 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 OR14J1Q9UGF5 321 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 ZNF230Q9UIE0 474 aaPredicted RBP22.62■■□□□ 1.21
MSX1-201ENST00000382723 ROS1P08922 2347 aa22.62■■□□□ 1.21
MSX1-201ENST00000382723 KMT2BQ9UMN6 2715 aaPredicted RBP22.61■■□□□ 1.21
MSX1-201ENST00000382723 DEGS1O15121 323 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 ADH4P08319 380 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 MRPS15P82914 257 aaKnown RBP22.61■■□□□ 1.21
MSX1-201ENST00000382723 OR52W1Q6IF63 320 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 FIP1L1Q6UN15 594 aaKnown RBP22.61■■□□□ 1.21
MSX1-201ENST00000382723 ACP7Q6ZNF0 438 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 C7orf50Q9BRJ6 194 aaKnown RBP22.61■■□□□ 1.21
MSX1-201ENST00000382723 ST6GALNAC5Q9BVH7 336 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 MMP28Q9H239 520 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 DECR2Q9NUI1 292 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 NLKQ9UBE8 527 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 EGR1P18146 543 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 BTCP35070 178 aa22.61■■□□□ 1.21
MSX1-201ENST00000382723 SFRP4Q6FHJ7 346 aaPredicted RBP22.61■■□□□ 1.21
MSX1-201ENST00000382723 MEX3BQ6ZN04 569 aaKnown RBP22.61■■□□□ 1.21
MSX1-201ENST00000382723 BPIFB2Q8N4F0 458 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms