RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PLCXD3Q63HM9 321 aa12.85□□□□□ -0.35
PRNP-201ENST00000379440 OR5M8Q8NGP6 311 aa12.85□□□□□ -0.35
PRNP-201ENST00000379440 WDYHV1Q96HA8 205 aa12.85□□□□□ -0.35
PRNP-201ENST00000379440 PRDM14Q9GZV8 571 aa12.85□□□□□ -0.35
PRNP-201ENST00000379440 ZNF701Q9NV72 531 aaPredicted RBP12.85□□□□□ -0.35
PRNP-201ENST00000379440 ZNF391Q9UJN7 358 aa12.85□□□□□ -0.35
PRNP-201ENST00000379440 DOCK7Q96N67 2140 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 DMXL1Q9Y485 3027 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 TRAV14DV4A0A0A6YYC5 116 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 XRCC2O43543 280 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 RGS11O94810 467 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 ACTL6AO96019 429 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 SERPINA5P05154 406 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 RAB4AP20338 218 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 SNRPEP62304 92 aaKnown RBP12.84□□□□□ -0.35
PRNP-201ENST00000379440 BRICD5Q6PL45 260 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 LHFPL2Q6ZUX7 228 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 BATF2Q8N1L9 274 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 OR13G1Q8NGZ3 307 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 MRPS24Q96EL2 167 aaKnown RBP12.84□□□□□ -0.35
PRNP-201ENST00000379440 MICU1Q9BPX6 476 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 FAAP24Q9BTP7 215 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 SEBOXQ9HB31 216 aaPredicted RBP12.84□□□□□ -0.35
PRNP-201ENST00000379440 TRGV5A0A0B4J1U4 118 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 FIGNL2A6NMB9 653 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 ZNF850A8MQ14 1090 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 HMSDA8MTL9 139 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 SERPINE3A8MV23 424 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 WT1P19544 449 aaPredicted RBP12.84□□□□□ -0.35
PRNP-201ENST00000379440 OR3A2P47893 321 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 RAB1AP62820 205 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 GK2Q14410 553 aaPredicted RBP12.84□□□□□ -0.35
PRNP-201ENST00000379440 RNPS1Q15287 305 aaKnown RBP12.84□□□□□ -0.35
PRNP-201ENST00000379440 COLCA1Q6ZS62 124 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 KCTD9Q7L273 389 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 ARRDC1Q8N5I2 433 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 MITD1Q8WV92 249 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 SPSB4Q96A44 273 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 C5orf66Q9H5L9 145 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 ASCL3Q9NQ33 180 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 CRIM1Q9NZV1 1036 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 GPR160Q9UJ42 338 aa12.84□□□□□ -0.35
PRNP-201ENST00000379440 ZNF816-ZNF321PA0A0X1KG74 233 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 MSTNO14793 375 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 SFTPBP07988 381 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 HLXQ14774 488 aaPredicted RBP12.83□□□□□ -0.36
PRNP-201ENST00000379440 PDCD1Q15116 288 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 PIGYQ3MUY2 71 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 LRRC37A5PQ49AS3 106 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 ACTBL2Q562R1 376 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 TMUB2Q71RG4 321 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 RNF122Q9H9V4 155 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 EHFQ9NZC4 300 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 LUZP4Q9P127 313 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 GPR132Q9UNW8 380 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 ZNF318Q5VUA4 2279 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 TNFSF10P50591 281 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 FUT6P51993 359 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 AADACL3Q5VUY0 350 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 CALHM1Q8IU99 346 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 FDCSPQ8NFU4 85 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 DMBX1Q8NFW5 382 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 C14orf144Q96I85 54 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 SLC7A11Q9UPY5 501 aa12.83□□□□□ -0.36
PRNP-201ENST00000379440 OR5H14A6NHG9 310 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 GEMIN2O14893 280 aaKnown RBP12.82□□□□□ -0.36
PRNP-201ENST00000379440 WISP2O76076 250 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 NGFP01138 241 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 CD82P27701 267 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 S100A11P31949 105 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 ATP1B3P54709 279 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 RRADP55042 308 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 PDZK1IP1Q13113 114 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 AVPI1Q5T686 147 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 RPUSD3Q6P087 351 aaKnown RBP12.82□□□□□ -0.36
PRNP-201ENST00000379440 OR5AP2Q8NGF4 316 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 OR56B2PQ8NGI1 322 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 DTD1Q8TEA8 209 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 DYRK2Q92630 601 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 EMG1Q92979 244 aaKnown RBP12.82□□□□□ -0.36
PRNP-201ENST00000379440 TMEM230Q96A57 120 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 PHB2Q99623 299 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 ARL6Q9H0F7 186 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 PRR13Q9NZ81 148 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 RFPL4AA6NLU0 287 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 RFPL4AL1F8VTS6 287 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 SOX8P57073 446 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 GMFBP60983 142 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 CHRFAM7AQ494W8 412 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 HIKESHIQ53FT3 197 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 FAHD2BQ6P2I3 314 aaPredicted RBP12.82□□□□□ -0.36
PRNP-201ENST00000379440 ASCL4Q6XD76 172 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 FBXL14Q8N1E6 418 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 TMEM178AQ8NBL3 297 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 OR51F2Q8NH61 342 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 COQ8AQ8NI60 647 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 CPNE2Q96FN4 548 aaPredicted RBP12.82□□□□□ -0.36
PRNP-201ENST00000379440 FAHD2AQ96GK7 314 aa12.82□□□□□ -0.36
PRNP-201ENST00000379440 ZNF629Q9UEG4 869 aaPredicted RBP12.82□□□□□ -0.36
PRNP-201ENST00000379440 AK3Q9UIJ7 227 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms