RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 ZDHHC23Q8IYP9 409 aa16.55■□□□□ 0.24
PCDHA4-201ENST00000378125 SHPKQ9UHJ6 478 aa16.55■□□□□ 0.24
PCDHA4-201ENST00000378125 PQLC2LA1A4F0 135 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 SHOXO15266 292 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 FCGR2CP31995 323 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 PIGPP57054 158 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 CYCSP99999 105 aaKnown RBP16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 PHLDA2Q53GA4 152 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 SGPP2Q8IWX5 399 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 GCNT2Q8N0V5 402 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 ZNF488Q96MN9 340 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 ARPC5LQ9BPX5 153 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 IL36GQ9NZH8 169 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 ZSCAN5BA6NJL1 495 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 ARR3P36575 388 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 WNT5AP41221 380 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 SURF2Q15527 256 aaPredicted RBP16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 OTOGLQ3ZCN5 2332 aa16.54■□□□□ 0.24
PCDHA4-201ENST00000378125 ZNF728P0DKX0 622 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 FUT3P21217 361 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 DTYMKP23919 212 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 TMEM200AQ86VY9 491 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 FDCSPQ8NFU4 85 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 MRPS24Q96EL2 167 aaKnown RBP16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 RNF122Q9H9V4 155 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 ATPIF1Q9UII2 106 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 BOD1L1Q8NFC6 3051 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 GALR2O43603 387 aaPredicted RBP16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 SYNGR1O43759 233 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 CTSDP07339 412 aaPredicted RBP16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 WT1P19544 449 aaPredicted RBP16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 APLNRP35414 380 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 SOX8P57073 446 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 CLN3Q13286 438 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 ELP2Q6IA86 826 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 PIP4P1Q86T03 277 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 MDP1Q86V88 176 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 OR1K1Q8NGR3 316 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 C2orf50Q96LR7 162 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 TECTBQ96PL2 329 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 RASL12Q9NYN1 266 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 MTCH1Q9NZJ7 389 aa16.53■□□□□ 0.24
PCDHA4-201ENST00000378125 TNFSF10P50591 281 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 RBM39Q14498 530 aaKnown RBP16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 CEACAM21Q3KPI0 293 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 ABCA11PQ4W5N1 156 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 IGSF11Q5DX21 431 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 FBXW9Q5XUX1 488 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 MYPOPQ86VE0 399 aaPredicted RBP16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 TMEM178AQ8NBL3 297 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 POC1AQ8NBT0 407 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 OR5T2Q8NGG2 359 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 OR11L1Q8NGX0 322 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 MARVELD3Q96A59 401 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 ZNF286AQ9HBT8 521 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 C12orf4Q9NQ89 552 aa16.52■□□□□ 0.24
PCDHA4-201ENST00000378125 CD300LBA8K4G0 201 aa16.52■□□□□ 0.23
PCDHA4-201ENST00000378125 CELA3BP08861 270 aa16.52■□□□□ 0.23
PCDHA4-201ENST00000378125 IAH1Q2TAA2 248 aaPredicted RBP16.52■□□□□ 0.23
PCDHA4-201ENST00000378125 FAM209AQ5JX71 171 aa16.52■□□□□ 0.23
PCDHA4-201ENST00000378125 OR2T2Q6IF00 324 aa16.52■□□□□ 0.23
PCDHA4-201ENST00000378125 P4HA3Q7Z4N8 544 aa16.52■□□□□ 0.23
PCDHA4-201ENST00000378125 EXTL1Q92935 676 aa16.52■□□□□ 0.23
PCDHA4-201ENST00000378125 MRPL24Q96A35 216 aaKnown RBP16.52■□□□□ 0.23
PCDHA4-201ENST00000378125 C1orf123Q9NWV4 160 aa16.52■□□□□ 0.23
PCDHA4-201ENST00000378125 CRYM-AS1A6NIL9 109 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 COX5BP10606 129 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 NOVA1P51513 510 aaKnown RBP16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 HAGHLQ6PII5 290 aaPredicted RBP16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 DHRS11Q6UWP2 260 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 OR5L1Q8NGL2 311 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 SLC25A32Q9H2D1 315 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 PCDHB16Q9NRJ7 776 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 MED12LQ86YW9 2145 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 DSPP15924 2871 aaKnown RBP16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 CNOT1A5YKK6 2376 aaKnown RBP16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 IGHV3-64DA0A0J9YX35 117 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 SIGLEC5O15389 551 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 OR5AC1P0C628 307 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 SNTB1Q13884 538 aaKnown RBP16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 TSC22D1Q15714 1073 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 TUSC1Q2TAM9 212 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 PRSS54Q6PEW0 395 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 NEK7Q8TDX7 302 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 PIK3IP1Q96FE7 263 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 HIST1H2AAQ96QV6 131 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 FAM117AQ9C073 453 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 SESN1Q9Y6P5 492 aa16.51■□□□□ 0.23
PCDHA4-201ENST00000378125 SHANK1Q9Y566 2161 aa16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 SCGB1D2O95969 90 aa16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 SLC30A7Q8NEW0 376 aa16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 SUN5Q8TC36 379 aa16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 RTN4IP1Q8WWV3 396 aaPredicted RBP16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 BCL2L2Q92843 193 aaPredicted RBP16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 ZDHHC11Q9H8X9 412 aa16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 OR2S2Q9NQN1 319 aa16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 CDRT15L2A8MXV6 281 aa16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 CA6P23280 308 aa16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 ECI1P42126 302 aa16.5■□□□□ 0.23
PCDHA4-201ENST00000378125 GGNBP1Q5YKI7 109 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms