RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 NMES1Q9C002 83 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 MIA3Q5JRA6 1907 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 BRCA1P38398 1863 aaKnown RBP15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 SSX2Q16385 188 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 TSPO2Q5TGU0 170 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 OR5A2Q8NGI9 324 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 UBTD1Q9HAC8 227 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 TINAGQ9UJW2 476 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 CYTIPO60759 359 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 LPAR6P43657 344 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 PRSS12P56730 875 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 TMPRSS3P57727 454 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 Q3ZCU0 254 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 CRIPAKQ8N1N5 446 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 MAP6Q96JE9 813 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 RFPL4AA6NLU0 287 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 AHRRA9YTQ3 701 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 RFPL4AL1F8VTS6 287 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 SEMG1P04279 462 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 RPS2P15880 293 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 CSRP3P50461 194 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 ZNF528Q3MIS6 628 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 ZBTB44Q8NCP5 570 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 FAM122AQ96E09 287 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 RNF7Q9UBF6 113 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 BCL2L11O43521 198 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 MPPED2Q15777 294 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 C11orf87Q6NUJ2 197 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 ZNF441Q8N8Z8 693 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 ADTRPQ96IZ2 230 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 ADAM19Q9H013 955 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 HES4Q9HCC6 221 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 ZFP36L2P47974 494 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 GGTLC2Q14390 218 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 IRF3Q14653 427 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 ADIPOR1Q96A54 375 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 TXN2Q99757 166 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 C3orf85A0A1B0GTC6 90 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 TSTD3H0UI37 97 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 CDIPTO14735 213 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 TRAF3IP2O43734 574 aaPredicted RBP15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 SLC25A6P12236 298 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 ZNF787Q6DD87 383 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 RPUSD3Q6P087 351 aaKnown RBP15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 OR10AD1Q8NGE0 317 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 NAA60Q9H7X0 242 aa15.72■□□□□ 0.11
CLSTN1-202ENST00000377298 H3BP45 60 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 DVL1O14640 695 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 RRASP10301 218 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 DVL1P1P54792 670 aaPredicted RBP15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 FOXO1Q12778 655 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 DHRS2Q13268 280 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 P2RY6Q15077 328 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 FAM214BQ7L5A3 538 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 SLC25A40Q8TBP6 338 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 FKBP11Q9NYL4 201 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 ANKRD20A5PA0PJZ0 165 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 FGF7P21781 194 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 MPV17LQ2QL34 196 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 TMEM41BQ5BJD5 291 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 OR10AC1Q8NH08 325 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 RAB40CQ96S21 281 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 OR2D2Q9H210 308 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 SCN3AQ9NY46 2000 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 TMEM210A6NLX4 147 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 CTDSPLO15194 276 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 COX7A2P2O60397 106 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 TXNDC12O95881 172 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 TIGITQ495A1 244 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 MDP1Q86V88 176 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 MOB3AQ96BX8 217 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 NDFIP1Q9BT67 221 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 CHST5Q9GZS9 411 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 ZNF629Q9UEG4 869 aaPredicted RBP15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 FUT5Q11128 374 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 PPP1R1AQ13522 171 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 WDR13Q9H1Z4 485 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 CA10Q9NS85 328 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 RASL12Q9NYN1 266 aa15.71■□□□□ 0.11
CLSTN1-202ENST00000377298 CD37P11049 281 aa15.71■□□□□ 0.1
CLSTN1-202ENST00000377298 IGLV3-21P80748 117 aaPredicted RBP15.71■□□□□ 0.1
CLSTN1-202ENST00000377298 CSRP2Q16527 193 aa15.71■□□□□ 0.1
CLSTN1-202ENST00000377298 TIPARPQ7Z3E1 657 aaKnown RBP15.71■□□□□ 0.1
CLSTN1-202ENST00000377298 MOGAT3Q86VF5 341 aa15.71■□□□□ 0.1
CLSTN1-202ENST00000377298 CTHRC1Q96CG8 243 aa15.71■□□□□ 0.1
CLSTN1-202ENST00000377298 ABHD1Q96SE0 405 aa15.71■□□□□ 0.1
CLSTN1-202ENST00000377298 C4orf51C9J302 202 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 UPK3AO75631 287 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 FGF2P09038 288 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 OR2B8PP59922 312 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 HAGHQ16775 308 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 SIGIRRQ6IA17 410 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 HIST2H3AQ71DI3 136 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 OR4F5Q8NH21 305 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 NEIL1Q96FI4 390 aaPredicted RBP15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 OR4F4Q96R69 305 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 TMPRSS13Q9BYE2 586 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 ANXA10Q9UJ72 324 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 HAND1O96004 215 aa15.7■□□□□ 0.1
CLSTN1-202ENST00000377298 SURF2Q15527 256 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms