RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TOMM40LQ969M1 308 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 ZNF286AQ9HBT8 521 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 KCNMB2Q9Y691 235 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 FRYQ5TBA9 3013 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 ZSCAN5BA6NJL1 495 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 SS18L1O75177 396 aaPredicted RBP17.4■□□□□ 0.38
VSX1-202ENST00000376709 CST4P01036 141 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 HOXB5P09067 269 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 SUN5Q8TC36 379 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 NANOS1Q8WY41 292 aaKnown RBP17.4■□□□□ 0.38
VSX1-202ENST00000376709 ZNF75AQ96N20 296 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 HIST1H2AAQ96QV6 131 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 OR51B6Q9H340 312 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 OPA3Q9H6K4 179 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 MED9Q9NWA0 146 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 C1orf123Q9NWV4 160 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 F5H0A9 414 aaPredicted RBP17.39■□□□□ 0.37
VSX1-202ENST00000376709 ZNF205O95201 554 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 BCL3P20749 454 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 FAM74A1Q5RGS3 127 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 DHRS11Q6UWP2 260 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 P4HA3Q7Z4N8 544 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 DPPA2Q7Z7J5 298 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 FDCSPQ8NFU4 85 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 OR10C1Q96KK4 312 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 LIME1Q9H400 295 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 DECR2Q9NUI1 292 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 TNRC6AQ8NDV7 1962 aaKnown RBP17.39■□□□□ 0.37
VSX1-202ENST00000376709 ZNF732B4DXR9 585 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 MARS2Q96GW9 593 aaKnown RBP17.39■□□□□ 0.37
VSX1-202ENST00000376709 C2orf50Q96LR7 162 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 ARPC5LQ9BPX5 153 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 FGF23Q9GZV9 251 aaPredicted RBP17.39■□□□□ 0.37
VSX1-202ENST00000376709 ZNF175Q9Y473 711 aa17.39■□□□□ 0.37
VSX1-202ENST00000376709 MED12LQ86YW9 2145 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 PTPRBP23467 1997 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 CD300LBA8K4G0 201 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 ZNF728P0DKX0 622 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 FXYD4P59646 89 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 LINC00052Q96N35 136 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 RNF126Q9BV68 326 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 SLC25A32Q9H2D1 315 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 GP6Q9HCN6 339 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 GSKIPQ9P0R6 139 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 SESN1Q9Y6P5 492 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 RIF1Q5UIP0 2472 aaKnown RBP17.38■□□□□ 0.37
VSX1-202ENST00000376709 TRBV6-7A0A0A0MS04 114 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 CRYM-AS1A6NIL9 109 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 FCGR2CP31995 323 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 WNT5AP41221 380 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 PIGPP57054 158 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 ABCA11PQ4W5N1 156 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 TMEM211Q6ICI0 200 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 MDP1Q86V88 176 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 SAXO1Q8IYX7 474 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 BCL2L2Q92843 193 aaPredicted RBP17.38■□□□□ 0.37
VSX1-202ENST00000376709 POM121Q96HA1 1249 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 DHRS9Q9BPW9 319 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 NUP50Q9UKX7 468 aa17.38■□□□□ 0.37
VSX1-202ENST00000376709 ANKRD30BLA7E2S9 258 aa17.37■□□□□ 0.37
VSX1-202ENST00000376709 DAZAP2Q15038 168 aaPredicted RBP17.37■□□□□ 0.37
VSX1-202ENST00000376709 SLC30A7Q8NEW0 376 aa17.37■□□□□ 0.37
VSX1-202ENST00000376709 Q8NFD4 153 aa17.37■□□□□ 0.37
VSX1-202ENST00000376709 GMPPAQ96IJ6 420 aaPredicted RBP17.37■□□□□ 0.37
VSX1-202ENST00000376709 MEMO1Q9Y316 297 aa17.37■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A10PA6NDY2 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A18PA6NE21 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A16PA6NEW6 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A20PA6NIJ5 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A8PA6NJQ4 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A7PA6NKC0 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A22PA8MWA6 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A12PA8MX19 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A5PA8MXJ8 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A23PA8MXZ1 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 H0YIZ8 118 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 TRAPPC2LH3BP13 241 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A15PP0C7V4 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A13PP0C7W8 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A14PP0C7W9 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 FAM90A24PP0C7X0 464 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 PET100P0DJ07 73 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 NUP62P37198 522 aaPredicted RBP17.36■□□□□ 0.37
VSX1-202ENST00000376709 FGF12P61328 243 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 ELP2Q6IA86 826 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 UNQ6126/PRO20091Q6UXV3 157 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 MKXQ8IYA7 352 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 OR5A2Q8NGI9 324 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 OR5L1Q8NGL2 311 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 PHYHIPLQ96FC7 376 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 ZP3P21754 424 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 PMELP40967 661 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 GLP1RP43220 463 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 PRSS54Q6PEW0 395 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 TMEM200AQ86VY9 491 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 EXTL1Q92935 676 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 RASL12Q9NYN1 266 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 COQ3Q9NZJ6 369 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 MTCH1Q9NZJ7 389 aa17.36■□□□□ 0.37
VSX1-202ENST00000376709 A0A1B0GW55 424 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms