RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SEBOXQ9HB31 216 aaPredicted RBP17.02■□□□□ 0.32
VSX1-201ENST00000376707 hADV38S2A0JD32 116 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 TMEM82A0PJX8 343 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 ODF3BA8MYP8 253 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 HAND1O96004 215 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 CYB5AP00167 134 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 RBP2P50120 134 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 RAB13P51153 203 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 CCR9P51686 369 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 ATP1B3P54709 279 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 MEF2CQ06413 473 aaPredicted RBP17.01■□□□□ 0.31
VSX1-201ENST00000376707 SSX2Q16385 188 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 ZNF626Q68DY1 528 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 HIST2H2BDQ6DRA6 164 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 UTS2BQ765I0 119 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 ENTHD1Q8IYW4 607 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 OR11H6Q8NGC7 330 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 RPS4Y2Q8TD47 263 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 CFHR4Q92496 578 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 ADAT3Q96EY9 351 aaPredicted RBP17.01■□□□□ 0.31
VSX1-201ENST00000376707 C9orf16Q9BUW7 83 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 CDCA4Q9BXL8 241 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 PITPNC1Q9UKF7 332 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 TCF19Q9Y242 345 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 GMPPBQ9Y5P6 360 aa17.01■□□□□ 0.31
VSX1-201ENST00000376707 TET2Q6N021 2002 aaPredicted RBP17.01■□□□□ 0.31
VSX1-201ENST00000376707 IGKV1-9A0A0C4DH69 117 aa17■□□□□ 0.31
VSX1-201ENST00000376707 TGP01266 2768 aa17■□□□□ 0.31
VSX1-201ENST00000376707 GABRR1P24046 479 aa17■□□□□ 0.31
VSX1-201ENST00000376707 PEX2P28328 305 aa17■□□□□ 0.31
VSX1-201ENST00000376707 POU3F4P49335 361 aa17■□□□□ 0.31
VSX1-201ENST00000376707 ACTA2P62736 377 aa17■□□□□ 0.31
VSX1-201ENST00000376707 ACTG2P63267 376 aa17■□□□□ 0.31
VSX1-201ENST00000376707 GRK1Q15835 563 aa17■□□□□ 0.31
VSX1-201ENST00000376707 LGALS12Q96DT0 336 aa17■□□□□ 0.31
VSX1-201ENST00000376707 S100A14Q9HCY8 104 aa17■□□□□ 0.31
VSX1-201ENST00000376707 AASSQ9UDR5 926 aa17■□□□□ 0.31
VSX1-201ENST00000376707 A0A0G2JK05 382 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 MPZL2O60487 215 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 IGHA1P01876 353 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 ZNF91Q05481 1191 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 TCF23Q7RTU1 214 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 TMEM219Q86XT9 240 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 FAM58AQ8N1B3 248 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 ZNF676Q8N7Q3 588 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 TPRX1Q8N7U7 411 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 RHOXF1Q8NHV9 184 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 PELI1Q96FA3 418 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 SLC29A1Q99808 456 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 CHST6Q9GZX3 395 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 ZNF702PQ9H963 129 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 RBFOX1Q9NWB1 397 aaKnown RBP16.99■□□□□ 0.31
VSX1-201ENST00000376707 IL36RNQ9UBH0 155 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 LINC00312Q9Y6C7 94 aa16.99■□□□□ 0.31
VSX1-201ENST00000376707 MEGF11A6BM72 1044 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 A6NDX4 124 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 OR4C45A6NMZ5 311 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 EBAG9O00559 213 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 OPN1MWP04001 364 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 HTR1AP08908 422 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 OCM2P0CE71 109 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 OCMP0CE72 109 aaPredicted RBP16.98■□□□□ 0.31
VSX1-201ENST00000376707 OPN1MW2P0DN77 364 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 OPN1MW3P0DN78 364 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 DBTP11182 482 aaKnown RBP16.98■□□□□ 0.31
VSX1-201ENST00000376707 ZNF20P17024 532 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 ATF1P18846 271 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 BCL3P20749 454 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 PRKACBP22694 351 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 DUSP1P28562 367 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 NPBWR2P48146 333 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 MTCP1P56278 107 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 HABP2Q14520 560 aaPredicted RBP16.98■□□□□ 0.31
VSX1-201ENST00000376707 LDLRAD2Q5SZI1 272 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 CCBE1Q6UXH8 406 aaPredicted RBP16.98■□□□□ 0.31
VSX1-201ENST00000376707 PQLC1Q8N2U9 271 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 OR52N4Q8NGI2 321 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 SPSB1Q96BD6 273 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 FGGYQ96C11 551 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 MRPL48Q96GC5 212 aaKnown RBP16.98■□□□□ 0.31
VSX1-201ENST00000376707 C4orf36Q96KX1 117 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 Q96MT0 163 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 MYCBPQ99417 103 aaPredicted RBP16.98■□□□□ 0.31
VSX1-201ENST00000376707 GLS2Q9UI32 602 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 HHLA2Q9UM44 414 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 SESN1Q9Y6P5 492 aa16.98■□□□□ 0.31
VSX1-201ENST00000376707 TRBV2A0A0J9YWF9 115 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 J3QLW9 94 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 F2RL2O00254 374 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 ZNF19P17023 458 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 PRKACAP17612 351 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 AZGP1P25311 298 aaKnown RBP16.97■□□□□ 0.31
VSX1-201ENST00000376707 SNU13P55769 128 aaKnown RBP16.97■□□□□ 0.31
VSX1-201ENST00000376707 GALEQ14376 348 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 ZBTB49Q6ZSB9 765 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 LHFPL2Q6ZUX7 228 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 SYS1Q8N2H4 156 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 HILPDAQ9Y5L2 63 aa16.97■□□□□ 0.31
VSX1-201ENST00000376707 LOC100130705A0A1B0GUX0 176 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 MGST3O14880 152 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms