RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PYCARD-AS1I3L0S3 204 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 GFYI3L273 518 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 AKR7A2O43488 359 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 C11orf87Q6NUJ2 197 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 NHLRC1Q6VVB1 395 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 PATE1Q8WXA2 126 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 STRCP1A6NGW2 1772 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 NUFIP2Q7Z417 695 aaKnown RBP11.16□□□□□ -0.62
VPS13A-204ENST00000376634 ARRDC1-AS1Q9H2J1 176 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 PSG11Q9UQ72 335 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 LMO7DNF2Z398 122 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 CCL17Q92583 94 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 SYT11Q9BT88 431 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 TBC1D26Q86UD7 250 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 OR11G2Q8NGC1 345 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 OR2T8A6NH00 312 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 CD96P40200 585 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 DUSP18Q8NEJ0 188 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 PRSS1P07477 247 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 TMEM108Q6UXF1 575 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 CACNG5Q9UF02 275 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 DHRS3O75911 302 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 LIMK1P53667 647 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 FOXF1Q12946 379 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 DUXBA0A1W2PPF3 345 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 POM121BA6NF01 834 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 IGHA1P01876 353 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 IGHA2P01877 340 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 HIST1H1EP10412 219 aaKnown RBP11.15□□□□□ -0.62
VPS13A-204ENST00000376634 TAS2R60P59551 318 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 OR2W3Q7Z3T1 314 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 FUNDC1Q8IVP5 155 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 NTNG2Q96CW9 530 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 PTHLHP12272 177 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 CD99P14209 185 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 ORM2P19652 201 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 G6PCP35575 357 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 IGSF23A1L1A6 192 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 FAM90A27PA6NNH2 459 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 KLF7O75840 302 aaPredicted RBP11.15□□□□□ -0.62
VPS13A-204ENST00000376634 ZNF343Q6P1L6 599 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 OR4S2Q8NH73 311 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 OR4C12Q96R67 309 aa11.15□□□□□ -0.62
VPS13A-204ENST00000376634 A0A087WUJ7 227 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 hADV38S2A0JD32 116 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 MFNGO00587 321 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 OPN1MWP04001 364 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 OPN1MW2P0DN77 364 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 OPN1MW3P0DN78 364 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 OR3A4PP47883 348 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 IL11RAQ14626 422 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 HSD17B13Q7Z5P4 300 aaPredicted RBP11.15□□□□□ -0.63
VPS13A-204ENST00000376634 MIEN1Q9BRT3 115 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 GLCCI1Q86VQ1 547 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 ZNF547Q8IVP9 402 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 IL22RA2Q969J5 263 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 KTI12Q96EK9 354 aaPredicted RBP11.15□□□□□ -0.63
VPS13A-204ENST00000376634 MMP24Q9Y5R2 645 aa11.15□□□□□ -0.63
VPS13A-204ENST00000376634 TRAV17A0A0B4J275 112 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 TMEM272A0A1B0GTI8 110 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 SOX15O60248 233 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 GLULP15104 373 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 SLC37A1P57057 533 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 KHDC3LQ587J8 217 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 MAMSTRQ6ZN01 415 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 OTOSQ8NHW6 89 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 SPPL3Q8TCT6 385 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 ZNF831Q5JPB2 1677 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 TMPRSS11DO60235 418 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 RHBDL1O75783 438 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 DNPH1O43598 174 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 CDC14BO60729 498 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 CST4P01036 141 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 SLC6A12P48065 614 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 PRSS36Q5K4E3 855 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 ARHGAP5-AS1Q96IT6 56 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 SIGLEC11Q96RL6 698 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 WSB1Q9Y6I7 421 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 ADAMTSL3P82987 1691 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 SIAH2O43255 324 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 SDHBP21912 280 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 CA6P23280 308 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 CCL7P80098 99 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 WFDC5Q8TCV5 224 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 POMT2Q9UKY4 750 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 EML6Q6ZMW3 1958 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 BSGP35613 385 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 SPINK9Q5DT21 86 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 B9D1Q9UPM9 204 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 ELOA3CA0A087WX78 387 aaPredicted RBP11.14□□□□□ -0.63
VPS13A-204ENST00000376634 TNFAIP6P98066 277 aaPredicted RBP11.14□□□□□ -0.63
VPS13A-204ENST00000376634 CCDC190Q86UF4 302 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 TM4SF19Q96DZ7 209 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 ANAPC1Q9H1A4 1944 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 FGF8P55075 233 aaPredicted RBP11.14□□□□□ -0.63
VPS13A-204ENST00000376634 MRPL13Q9BYD1 178 aaKnown RBP11.14□□□□□ -0.63
VPS13A-204ENST00000376634 SMIM18P0DKX4 95 aa11.14□□□□□ -0.63
VPS13A-204ENST00000376634 ACAA2P42765 397 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms