RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TCTEX1D2Q8WW35 142 aa12.27□□□□□ -0.44
CLCNKA-202ENST00000375692 LNP1A1A4G5 178 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 YIF1AO95070 293 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 TIAF1O95411 115 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 PNLIPP16233 465 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 PMELP40967 661 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 ECI1P42126 302 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 CSNK1A1P48729 337 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 PRAMEF20Q5VT98 475 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 FBXW12Q6X9E4 464 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 COMMD1Q8N668 190 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 OR2M3Q8NG83 312 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 SDK2Q58EX2 2172 aa12.27□□□□□ -0.45
CLCNKA-202ENST00000375692 ZNF727A8MUV8 499 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 PPIHO43447 177 aaKnown RBP12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 CER1O95813 267 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 IGHV2-70P01814 119 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 MSR1P21757 451 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 CTSSP25774 331 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 S100PP25815 95 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 GUCA1AP43080 201 aaPredicted RBP12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 CEBPGP53567 150 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 RPS23P62266 143 aaKnown RBP12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 IFI44Q8TCB0 444 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 SLC22A8Q8TCC7 542 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 PP6455Q8WZ26 134 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 WDR77Q9BQA1 342 aaPredicted RBP12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 RBM24Q9BX46 236 aaKnown RBP12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 NECAP2Q9NVZ3 263 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 IGKV1-27A0A075B6S5 117 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 NSG1A0A0A6YYJ2 146 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 CA11O75493 328 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 OR2C1O95371 312 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 CLINT1Q14677 625 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 ADPRHL1Q8NDY3 354 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 GJC3Q8NFK1 279 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 SLC39A7Q92504 469 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 SLAMF9Q96A28 289 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 SGK3Q96BR1 496 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 ZNF837Q96EG3 531 aaPredicted RBP12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 C18orf12Q96KH6 178 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 JSRP1Q96MG2 331 aaPredicted RBP12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 ZNF385AQ96PM9 386 aaKnown RBP12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 SLC2A9Q9NRM0 540 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 MMP24Q9Y5R2 645 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 EML6Q6ZMW3 1958 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 ZNF318Q5VUA4 2279 aa12.26□□□□□ -0.45
CLCNKA-202ENST00000375692 IGHV5-10-1A0A0J9YXX1 117 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 A0A0U1RQV5 110 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 AQP7P3A6NL99 342 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 CDRT15L2A8MXV6 281 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 H7C1Q1 480 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 LMO1P25800 156 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 MSX1P28360 303 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 ARL6IP1Q15041 203 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 RHEBQ15382 184 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 RSU1Q15404 277 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 MEX3BQ6ZN04 569 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 LIAT1Q6ZQX7 453 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 CPEB2Q7Z5Q1 589 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 WDSUB1Q8N9V3 476 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 KDF1Q8NAX2 398 aaPredicted RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 RNF138Q8WVD3 245 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 MYOTQ9UBF9 498 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 CELSR3Q9NYQ7 3312 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 FAM24AA6NFZ4 105 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 M0R135 149 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 TLX3O43711 291 aaPredicted RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 OMGP23515 440 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 RPS10P46783 165 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 ZNF133P52736 654 aaPredicted RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 SUCLG1P53597 346 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 PPA1Q15181 289 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 PIGYQ3MUY2 71 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 SOHLH1Q5JUK2 328 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 GPR157Q5UAW9 335 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 SLC22A25Q6T423 547 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 SUMF1Q8NBK3 374 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 MSI2Q96DH6 328 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 ZNF799Q96GE5 643 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 PLEK2Q9NYT0 353 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 HDGFL3Q9Y3E1 203 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 CUL9Q8IWT3 2517 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 GEMIN2O14893 280 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 ST8SIA3O43173 380 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 PHF1O43189 567 aaPredicted RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 DUSP1P28562 367 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 LSM6P62312 80 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 NKAIN1Q4KMZ8 207 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 RTL6Q6ICC9 239 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 BATF2Q8N1L9 274 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 SUMF2Q8NBJ7 301 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 MR1Q95460 341 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 NABP1Q96AH0 204 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 GALNT14Q96FL9 552 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 PBDC1Q9BVG4 233 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 GGACTQ9BVM4 153 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 TGIF2Q9GZN2 237 aa12.25□□□□□ -0.45
CLCNKA-202ENST00000375692 METTL9Q9H1A3 318 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms