RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FOXB1Q99853 325 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 SH3BGRL3Q9H299 93 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 TRBV5-7A0A0A0MS05 114 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 CLEC18AA5D8T8 446 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 NKX2-6A6NCS4 301 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 RBFOX3A6NFN3 312 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 SPINT2O43291 252 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 KLF4O43474 513 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 DLK1P80370 383 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF345Q14585 488 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF383Q8NA42 475 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 CLEC18CQ8NCF0 446 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 MSI2Q96DH6 328 aaKnown RBP5.76□□□□□ -1.49
SMC1A-202ENST00000375340 GAR1Q9NY12 217 aaKnown RBP5.76□□□□□ -1.49
SMC1A-202ENST00000375340 XKRY2A2RUG3 117 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 LRP5LA4QPB2 252 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 M0R1B8 84 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ACTL6BO94805 426 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 IGHV3-13P01766 116 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 IGHV3-7P01780 117 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 JMJD6Q6NYC1 403 aaPredicted RBP5.76□□□□□ -1.49
SMC1A-202ENST00000375340 LHX4Q969G2 390 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 SLC25A22Q9H936 323 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 PPP5D1E7EU14 171 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 FCARP24071 287 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 PABPC1L2AQ5JQF8 200 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 C9orf152Q5JTZ5 239 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 LDLRAD3Q86YD5 345 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 TTRP02766 147 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 SRFP11831 508 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF90Q03938 601 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 RBMXL3Q8N7X1 1067 aaKnown RBP5.76□□□□□ -1.49
SMC1A-202ENST00000375340 H1FXQ92522 213 aaKnown RBP5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ACTR3CQ9C0K3 210 aaPredicted RBP5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ADAM19Q9H013 955 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 CRISPLD2Q9H0B8 497 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 KIAA1671Q9BY89 1806 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF273Q14593 569 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 PRAMEF5Q5TYX0 476 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 PRAMEF6Q5VXH4 476 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 FAHD2BQ6P2I3 314 aaPredicted RBP5.76□□□□□ -1.49
SMC1A-202ENST00000375340 FAHD2AQ96GK7 314 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 RAB33BQ9H082 229 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF737O75373 536 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 OR8U1Q8NH10 309 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 RARRES2Q99969 163 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 SMOC1Q9H4F8 434 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 CACNG5Q9UF02 275 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 A0A1W2PQD3 144 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 AQP7P3A6NL99 342 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 H7BYZ3 331 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 FUT3P21217 361 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF573Q86YE8 665 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 GAPTQ8N292 157 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 POC1BQ8TC44 478 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 PP6455Q8WZ26 134 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 CLCF1Q9UBD9 225 aa5.76□□□□□ -1.49
SMC1A-202ENST00000375340 ALPK2Q86TB3 2170 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 TMPRSS7Q7RTY8 843 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 GHRLQ9UBU3 117 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 HSF4Q9ULV5 492 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 YIF1AO95070 293 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 VAMP5O95183 116 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 TNFSF4P23510 183 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 SULT1A1P50225 295 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 SPINK14Q6IE38 97 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 GCNT2Q8N0V5 402 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 UBAC2Q8NBM4 344 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 NTNG2Q96CW9 530 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 GPHA2Q96T91 129 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 USB1Q9BQ65 265 aaKnown RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 SARGQ9BW04 601 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF320A2RRD8 509 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 FIGNL2A6NMB9 653 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 DVL1O14640 695 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 H3F3AP84243 136 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 MZT1Q08AG7 82 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 OR10D3Q8NH80 312 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 OR10C1Q96KK4 312 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 MENTQ9BUN1 341 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 ERRFI1Q9UJM3 462 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 TRAV39A0A0B4J263 110 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 TGFBR3LH3BV60 316 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 CTSDP07339 412 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 MMP7P09237 267 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 KLK2P20151 261 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 MDKP21741 143 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 SCCPDHQ8NBX0 429 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 ATP5SQ99766 215 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 PHOX2AO14813 284 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 CD1AP06126 327 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 ACKR3P25106 362 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 COL19A1Q14993 1142 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 TGIF1Q15583 401 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 RNF212Q495C1 297 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 SLC36A1Q7Z2H8 476 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 HOGA1Q86XE5 327 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 PUSL1Q8N0Z8 303 aaKnown RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 OR6X1Q8NH79 312 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 RNF133Q8WVZ7 376 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms