RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RHBDD2Q6NTF9 364 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 SLC25A47Q6Q0C1 308 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 STT3BQ8TCJ2 826 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 TMEM9BQ9NQ34 198 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 HDGFL3Q9Y3E1 203 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 FAM221AA4D161 298 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 GATCO43716 136 aaKnown RBP9.66□□□□□ -0.86
CCDC40-203ENST00000374877 HTR5AP47898 357 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 TMEM187Q14656 261 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF674Q2M3X9 581 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 BRICD5Q6PL45 260 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 C20orf196Q8IYI0 205 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 DYRK2Q92630 601 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 MR1Q95460 341 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF700Q9H0M5 742 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF581Q9P0T4 197 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 CDRT15L2A8MXV6 281 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 ST8SIA3O43173 380 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 IL11RAQ14626 422 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 GPR157Q5UAW9 335 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 HEPN1Q6WQI6 88 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 MEX3BQ6ZN04 569 aaKnown RBP9.66□□□□□ -0.86
CCDC40-203ENST00000374877 DTX1Q86Y01 620 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 LRRC18Q8N456 261 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 TM2D1Q9BX74 207 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 PISDQ9UG56 409 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 ZDHHC8Q9ULC8 765 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 DMRT1Q9Y5R6 373 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 H7C1Q1 480 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 FGF5P12034 268 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 OMGP23515 440 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 SUCLG1P53597 346 aaKnown RBP9.65□□□□□ -0.86
CCDC40-203ENST00000374877 SUMO3P55854 103 aaPredicted RBP9.65□□□□□ -0.86
CCDC40-203ENST00000374877 PYY3Q5JQD4 70 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 RTL6Q6ICC9 239 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 ZFP62Q8NB50 900 aaPredicted RBP9.65□□□□□ -0.86
CCDC40-203ENST00000374877 LFNGQ8NES3 379 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 SGK3Q96BR1 496 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 OR6C1Q96RD1 312 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 GPR173Q9NS66 373 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 NECAP2Q9NVZ3 263 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 SHANK1Q9Y566 2161 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 OR5H15A6NDH6 313 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 RRP8O43159 456 aaKnown RBP9.65□□□□□ -0.86
CCDC40-203ENST00000374877 SPRY1O43609 319 aaPredicted RBP9.65□□□□□ -0.86
CCDC40-203ENST00000374877 DHRS3O75911 302 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 LY86O95711 162 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 DUSP1P28562 367 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 TAGLN2P37802 199 aaKnown RBP9.65□□□□□ -0.86
CCDC40-203ENST00000374877 MTCP1P56278 107 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 PRSS12P56730 875 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 CCL20P78556 96 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 TCF15Q12870 199 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 HAGHQ16775 308 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 CDPF1Q6NVV7 123 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF343Q6P1L6 599 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 APCDD1LQ8NCL9 501 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 AGBL5Q8NDL9 886 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 OR11L1Q8NGX0 322 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 HAS2Q92819 552 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 PIGQQ9BRB3 760 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 ABHD14AQ9BUJ0 271 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 METTL7AQ9H8H3 244 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 AK3Q9UIJ7 227 aa9.65□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF729A6NN14 1252 aaPredicted RBP9.65□□□□□ -0.87
CCDC40-203ENST00000374877 MSTNO14793 375 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 PHF1O43189 567 aaPredicted RBP9.65□□□□□ -0.87
CCDC40-203ENST00000374877 HOXA5P20719 270 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 ALDH3B1P43353 468 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 ZNF133P52736 654 aaPredicted RBP9.65□□□□□ -0.87
CCDC40-203ENST00000374877 CLDN17P56750 224 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 GNMTQ14749 295 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 CPEB2Q7Z5Q1 589 aaKnown RBP9.65□□□□□ -0.87
CCDC40-203ENST00000374877 PRSS33Q8NF86 280 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 OR2G3Q8NGZ4 309 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 HPSE2Q8WWQ2 592 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 NELFAQ9H3P2 528 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 SLC2A9Q9NRM0 540 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 FER1L5A0AVI2 2057 aa9.65□□□□□ -0.87
CCDC40-203ENST00000374877 CABIN1Q9Y6J0 2220 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 TRBV11-1A0A0K0K1C0 115 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 FAM230AA0A1W2PPH8 454 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 H3BQ15 152 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 DBHP09172 617 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 UBE2KP61086 200 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 RSU1Q15404 277 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 PLPPR5Q32ZL2 321 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 PDZD11Q5EBL8 140 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 FAM69BQ5VUD6 431 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 LIAT1Q6ZQX7 453 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 ZNF383Q8NA42 475 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 OR6X1Q8NH79 312 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 POC1BQ8TC44 478 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 MRGPRX4Q96LA9 322 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 TGIF2Q9GZN2 237 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 CHST5Q9GZS9 411 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 GAR1Q9NY12 217 aaKnown RBP9.64□□□□□ -0.87
CCDC40-203ENST00000374877 DOK5Q9P104 306 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 FAM24AA6NFZ4 105 aa9.64□□□□□ -0.87
CCDC40-203ENST00000374877 K7N7A8 449 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms