RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 BCL2L11O43521 198 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 ADAP1O75689 374 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 RLN2P04090 185 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 SFTPBP07988 381 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 OR5H8P0DN80 308 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 CHATP28329 748 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 ARR3P36575 388 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 SOX8P57073 446 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 RAB1AP62820 205 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 SUPT4H1P63272 117 aaKnown RBP10.43□□□□□ -0.74
HMGCL-202ENST00000374487 PLP2Q04941 152 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 PLEKHN1Q494U1 663 aaPredicted RBP10.43□□□□□ -0.74
HMGCL-202ENST00000374487 BRICD5Q6PL45 260 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 MRPL21Q7Z2W9 205 aaKnown RBP10.43□□□□□ -0.74
HMGCL-202ENST00000374487 OR10AD1Q8NGE0 317 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 OR5M9Q8NGP3 310 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 ST8SIA2Q92186 375 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 SULT4A1Q9BR01 284 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 ZNF471Q9BX82 626 aaPredicted RBP10.43□□□□□ -0.74
HMGCL-202ENST00000374487 ACKR4Q9NPB9 350 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 PRR13Q9NZ81 148 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 IL36GQ9NZH8 169 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 ZNF581Q9P0T4 197 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 SHPKQ9UHJ6 478 aa10.43□□□□□ -0.74
HMGCL-202ENST00000374487 RNF222A6NCQ9 220 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 ZNHIT1O43257 154 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 DTYMKP23919 212 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 IGFBP7Q16270 282 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 ANKRD55Q3KP44 614 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 RGS7BPQ6MZT1 257 aaPredicted RBP10.42□□□□□ -0.74
HMGCL-202ENST00000374487 SLC25A26Q70HW3 274 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 NUFIP2Q7Z417 695 aaKnown RBP10.42□□□□□ -0.74
HMGCL-202ENST00000374487 ZNF611Q8N823 705 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 Q8NA96 180 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 ZFP62Q8NB50 900 aaPredicted RBP10.42□□□□□ -0.74
HMGCL-202ENST00000374487 OR56B2PQ8NGI1 322 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 DCUN1D4Q92564 292 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 APOBEC3DQ96AK3 386 aaPredicted RBP10.42□□□□□ -0.74
HMGCL-202ENST00000374487 CXorf58Q96LI9 332 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 REPIN1Q9BWE0 567 aaKnown RBP10.42□□□□□ -0.74
HMGCL-202ENST00000374487 C12orf49Q9H741 205 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 NECAP2Q9NVZ3 263 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 SDHAF2Q9NX18 166 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 GPR160Q9UJ42 338 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 SESN1Q9Y6P5 492 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 ZNF462Q96JM2 2506 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 IFNA2P01563 188 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 FCGR3AP08637 254 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 COX5BP10606 129 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 ZNF250P15622 560 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 LUMP51884 338 aaPredicted RBP10.42□□□□□ -0.74
HMGCL-202ENST00000374487 ZNF766Q5HY98 468 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 NSUN5P2Q63ZY6 315 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 CALHM1Q8IU99 346 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 LRRC20Q8TCA0 184 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 LIPGQ9Y5X9 500 aa10.42□□□□□ -0.74
HMGCL-202ENST00000374487 COL6A6A6NMZ7 2263 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 TEX13DA0A0J9YY54 714 aaPredicted RBP10.41□□□□□ -0.74
HMGCL-202ENST00000374487 FAM221AA4D161 298 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 F5H0A9 414 aaPredicted RBP10.41□□□□□ -0.74
HMGCL-202ENST00000374487 SHOXO15266 292 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 OR7C1O76099 320 aaPredicted RBP10.41□□□□□ -0.74
HMGCL-202ENST00000374487 CRYZL1O95825 349 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 RBMXP38159 391 aaKnown RBP10.41□□□□□ -0.74
HMGCL-202ENST00000374487 PRDX4Q13162 271 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 PDCD1Q15116 288 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 SGPP2Q8IWX5 399 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 TMEM178AQ8NBL3 297 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 DYRK2Q92630 601 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 ZNF442Q9H7R0 627 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 TRGV5A0A0B4J1U4 118 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 A0A1B0GW55 424 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 ZNF503-AS2A6NEH8 195 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 CDK2AP1O14519 115 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 KCNAB3O43448 404 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 PDCD6O75340 191 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 WISP2O76076 250 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 HOXB5P09067 269 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 DUX4L2P0CJ85 424 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 DUX4L3P0CJ86 424 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 DUX4L4P0CJ87 422 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 DUX4L5P0CJ88 424 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 DUX4L6P0CJ89 424 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 DUX4L7P0CJ90 424 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 SFTPCP11686 197 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 NUP62P37198 522 aaPredicted RBP10.41□□□□□ -0.74
HMGCL-202ENST00000374487 RBM11P57052 281 aaKnown RBP10.41□□□□□ -0.74
HMGCL-202ENST00000374487 BATF2Q8N1L9 274 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 RELL2Q8NC24 303 aaPredicted RBP10.41□□□□□ -0.74
HMGCL-202ENST00000374487 ARPC5LQ9BPX5 153 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 WDR13Q9H1Z4 485 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 SLC25A32Q9H2D1 315 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 MED9Q9NWA0 146 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 GSKIPQ9P0R6 139 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 DUX4Q9UBX2 424 aa10.41□□□□□ -0.74
HMGCL-202ENST00000374487 TMA7Q9Y2S6 64 aaKnown RBP10.41□□□□□ -0.74
HMGCL-202ENST00000374487 MPTX1A8MV57 137 aa10.4□□□□□ -0.74
HMGCL-202ENST00000374487 CTSDP07339 412 aaPredicted RBP10.4□□□□□ -0.74
HMGCL-202ENST00000374487 RPS2P15880 293 aaKnown RBP10.4□□□□□ -0.74
HMGCL-202ENST00000374487 FUT3P21217 361 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms