RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 OR1F12Q8NHA8 337 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 OR2D2Q9H210 308 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 BET1LQ9NYM9 111 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 TMEM272A0A1B0GTI8 110 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 RHBDL1O75783 438 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 MAGEA5P43359 124 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 MICBQ29980 383 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 OR4C3Q8NH37 302 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 WSB1Q9Y6I7 421 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 FAM24AA6NFZ4 105 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 ANKRD34CP0C6C1 535 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 TMIGD3P0DMS9 266 aaPredicted RBP12.73□□□□□ -0.37
TRAF1-201ENST00000373887 PTOV1Q86YD1 416 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 APOBEC3DQ96AK3 386 aaPredicted RBP12.73□□□□□ -0.37
TRAF1-201ENST00000373887 AKIRIN1Q9H9L7 192 aaPredicted RBP12.73□□□□□ -0.37
TRAF1-201ENST00000373887 MBD1Q9UIS9 605 aaPredicted RBP12.73□□□□□ -0.37
TRAF1-201ENST00000373887 FPR2P25090 351 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 APOBEC4Q8WW27 367 aaKnown RBP12.72□□□□□ -0.37
TRAF1-201ENST00000373887 FAAP24Q9BTP7 215 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 GPR87Q9BY21 358 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 MYOZ1Q9NP98 299 aaPredicted RBP12.72□□□□□ -0.37
TRAF1-201ENST00000373887 TCRBV5S2A0A599 114 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 SERPINE3A8MV23 424 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 IGHA1P01876 353 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 IGHA2P01877 340 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 CST2P09228 141 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 GLDNQ6ZMI3 551 aaPredicted RBP12.72□□□□□ -0.37
TRAF1-201ENST00000373887 LPAR5Q9H1C0 372 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 SLC6A13Q9NSD5 602 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 CT62P0C5K7 136 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 C5orf17Q8NAS9 161 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 LRRC3BQ96PB8 259 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 TAAR3PQ9P1P4 343 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 OR2T8A6NH00 312 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 K7ESF4 209 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 FGF2P09038 288 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 BCL3P20749 454 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 OR2A5Q96R48 311 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 ZNF385DQ9H6B1 395 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 SLC45A2Q9UMX9 530 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 MRPS18BQ9Y676 258 aaKnown RBP12.72□□□□□ -0.37
TRAF1-201ENST00000373887 FUT3P21217 361 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 MMP15P51511 669 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 PRICKLE4Q2TBC4 344 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 FOXJ3Q9UPW0 622 aa12.72□□□□□ -0.37
TRAF1-201ENST00000373887 C3orf85A0A1B0GTC6 90 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 CD96P40200 585 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 OR2W3Q7Z3T1 314 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.37
TRAF1-201ENST00000373887 AGFG2O95081 481 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 GCSHP23434 173 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 STPG1Q5TH74 334 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 RBPMS2Q6ZRY4 209 aaKnown RBP12.71□□□□□ -0.37
TRAF1-201ENST00000373887 SLC16A13Q7RTY0 426 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 FLYWCH2Q96CP2 140 aaKnown RBP12.71□□□□□ -0.37
TRAF1-201ENST00000373887 GRAMD2BQ96HH9 432 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 MRPL37Q9BZE1 423 aaKnown RBP12.71□□□□□ -0.37
TRAF1-201ENST00000373887 CACFD1Q9UGQ2 172 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 CASP8AP2Q9UKL3 1982 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.37
TRAF1-201ENST00000373887 HRASP01112 189 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 KIR2DL1P43626 348 aaPredicted RBP12.71□□□□□ -0.37
TRAF1-201ENST00000373887 TRAT1Q6PIZ9 186 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 SLC36A1Q7Z2H8 476 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 ARL6IP6Q8N6S5 226 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 OR4D10Q8NGI6 311 aa12.71□□□□□ -0.37
TRAF1-201ENST00000373887 PTPRZ1P23471 2315 aaPredicted RBP12.71□□□□□ -0.38
TRAF1-201ENST00000373887 COL4A1P02462 1669 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 C3orf80F5H4A9 247 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 TNFRSF1AP19438 455 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 AQP6Q13520 282 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 INSL4Q14641 139 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 TNXAQ16473 311 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 ZBTB37Q5TC79 503 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 FAM210BQ96KR6 192 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 COA4Q9NYJ1 87 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 CACNG5Q9UF02 275 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 HSPB2A8KAH6 182 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 HSPB2Q16082 182 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 OR10G4Q8NGN3 311 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 OR10G9Q8NGN4 311 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 OR10G7Q8NGN6 311 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 PHYHIPLQ96FC7 376 aa12.71□□□□□ -0.38
TRAF1-201ENST00000373887 OR4C46A6NHA9 309 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 WNT1P04628 370 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 C19orf57Q0VDD7 668 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 SMIM4Q8WVI0 70 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 ZFP64Q9NPA5 681 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 IL36GQ9NZH8 169 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 RNF24Q9Y225 148 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 PPIL1Q9Y3C6 166 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 RPL30P62888 115 aaKnown RBP12.7□□□□□ -0.38
TRAF1-201ENST00000373887 MESP2Q0VG99 397 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 C19orf48Q6RUI8 117 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 C6orf201Q7Z4U5 140 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 DOCK5Q9H7D0 1870 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 ZNF205O95201 554 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms