RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 RTL6Q6ICC9 239 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 DHRS13Q6UX07 377 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 TMEM251Q8N6I4 163 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 SLAMF9Q96A28 289 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 BSCL2Q96G97 398 aaPredicted RBP20.53■□□□□ 0.88
CDK9-201ENST00000373264 DDA1Q9BW61 102 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 OR51B6Q9H340 312 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 DECR2Q9NUI1 292 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 RBM11P57052 281 aaKnown RBP20.53■□□□□ 0.88
CDK9-201ENST00000373264 DHRS11Q6UWP2 260 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 LYZL2Q7Z4W2 148 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 VASH2Q86V25 355 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 ZNF100Q8IYN0 542 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 GPHA2Q96T91 129 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 LDAHQ9H6V9 325 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 ZNF442Q9H7R0 627 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 TRIM77I1YAP6 450 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 ABCD4O14678 606 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 SP9P0CG40 484 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 CD79AP11912 226 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 BCL3P20749 454 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 GPM6AP51674 278 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 PDSS1Q5T2R2 415 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 RTN4IP1Q8WWV3 396 aaPredicted RBP20.52■□□□□ 0.88
CDK9-201ENST00000373264 TMEM45BQ96B21 275 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 CNTNAP3BQ96NU0 1288 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 CNTNAP3Q9BZ76 1288 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 PLA2G2EQ9NZK7 142 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 CDX4O14627 284 aaPredicted RBP20.52■□□□□ 0.88
CDK9-201ENST00000373264 DUSP1P28562 367 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 MST1LQ2TV78 715 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 NSUN5P2Q63ZY6 315 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 OR4A4PQ8NGN8 299 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 HPSE2Q8WWQ2 592 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 SPSB4Q96A44 273 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 ZPBPQ9BS86 351 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 RGCCQ9H4X1 137 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 ZC4H2Q9NQZ6 224 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 TMEM100Q9NV29 134 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 EDARQ9UNE0 448 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 LIPGQ9Y5X9 500 aa20.52■□□□□ 0.88
CDK9-201ENST00000373264 IGKV3D-15A0A087WSY6 115 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 A0A1B0GW55 424 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 GPR31O00270 319 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 LILRA1O75019 489 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 DIRAS3O95661 229 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 F12P00748 615 aaPredicted RBP20.51■□□□□ 0.87
CDK9-201ENST00000373264 DUX4L2P0CJ85 424 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 DUX4L3P0CJ86 424 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 DUX4L4P0CJ87 422 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 DUX4L5P0CJ88 424 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 DUX4L6P0CJ89 424 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 DUX4L7P0CJ90 424 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 DTYMKP23919 212 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 COLCA1Q6ZS62 124 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 NUFIP2Q7Z417 695 aaKnown RBP20.51■□□□□ 0.87
CDK9-201ENST00000373264 DUX4Q9UBX2 424 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 LRP3O75074 770 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 PDCD6O75340 191 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 ID4P47928 161 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 PIGMQ9H3S5 423 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 LHX6Q9UPM6 363 aa20.51■□□□□ 0.87
CDK9-201ENST00000373264 ZNF705EA8MWA4 302 aaPredicted RBP20.5■□□□□ 0.87
CDK9-201ENST00000373264 DNASE2O00115 360 aaPredicted RBP20.5■□□□□ 0.87
CDK9-201ENST00000373264 XRCC2O43543 280 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 HAAOP46952 286 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 PRDX4Q13162 271 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 GUCA2BQ16661 112 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 PRDM14Q9GZV8 571 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 SLC2A9Q9NRM0 540 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 PARPBPQ9NWS1 579 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 STARD10Q9Y365 291 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 FBXO24O75426 580 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 NAAAQ02083 359 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 PLGLB1Q02325 96 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 MALLQ13021 153 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 TMEM187Q14656 261 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 ABCA11PQ4W5N1 156 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 LHFPL5Q8TAF8 219 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 CPNE2Q96FN4 548 aaPredicted RBP20.5■□□□□ 0.87
CDK9-201ENST00000373264 HRH4Q9H3N8 390 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 C12orf49Q9H741 205 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 FAM96BQ9Y3D0 163 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 KMT2EQ8IZD2 1858 aa20.5■□□□□ 0.87
CDK9-201ENST00000373264 AADACP22760 399 aa20.49■□□□□ 0.87
CDK9-201ENST00000373264 ADAMTS17Q8TE56 1095 aa20.49■□□□□ 0.87
CDK9-201ENST00000373264 RNF141Q8WVD5 230 aa20.49■□□□□ 0.87
CDK9-201ENST00000373264 PARP12Q9H0J9 701 aaKnown RBP20.49■□□□□ 0.87
CDK9-201ENST00000373264 NAA60Q9H7X0 242 aa20.49■□□□□ 0.87
CDK9-201ENST00000373264 ZNF883P0CG24 379 aa20.49■□□□□ 0.87
CDK9-201ENST00000373264 NME2P22392 152 aa20.49■□□□□ 0.87
CDK9-201ENST00000373264 RPL12P30050 165 aaKnown RBP20.49■□□□□ 0.87
CDK9-201ENST00000373264 OR5T2Q8NGG2 359 aa20.49■□□□□ 0.87
CDK9-201ENST00000373264 ERGIC1Q969X5 290 aa20.49■□□□□ 0.87
CDK9-201ENST00000373264 ZNF488Q96MN9 340 aa20.49■□□□□ 0.87
CDK9-201ENST00000373264 REPIN1Q9BWE0 567 aaKnown RBP20.49■□□□□ 0.87
CDK9-201ENST00000373264 ZNF552Q9H707 407 aaPredicted RBP20.49■□□□□ 0.87
CDK9-201ENST00000373264 OR52M1Q8NGK5 317 aa20.48■□□□□ 0.87
CDK9-201ENST00000373264 C12orf4Q9NQ89 552 aa20.48■□□□□ 0.87
CDK9-201ENST00000373264 IL36GQ9NZH8 169 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms