RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 AFF3P51826 1226 aaKnown RBP12.89□□□□□ -0.35
COL9A2-202ENST00000372748 UBE2KP61086 200 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 RND3P61587 244 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 PDCD1Q15116 288 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 GPR157Q5UAW9 335 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 SLC25A47Q6Q0C1 308 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 NFAM1Q8NET5 270 aaPredicted RBP12.89□□□□□ -0.35
COL9A2-202ENST00000372748 TM2D1Q9BX74 207 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 GPR173Q9NS66 373 aa12.89□□□□□ -0.35
COL9A2-202ENST00000372748 A0A1W2PNV4 684 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 PHF1O43189 567 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-202ENST00000372748 ECI1P42126 302 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 RGS19P49795 217 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL9A2-202ENST00000372748 ELOBQ15370 118 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 TMEM176BQ3YBM2 270 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-202ENST00000372748 CADM4Q8NFZ8 388 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 OR10G3Q8NGC4 313 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 S100PBPQ96BU1 408 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 OR6C1Q96RD1 312 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 RRP8O43159 456 aaKnown RBP12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H2BKO60814 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H2BJP06899 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 RNF224P0DH78 156 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H2BOP23527 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 ATP6V0CP27449 155 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H2BBP33778 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 MTCP1P56278 107 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H2BDP58876 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H2BCP62807 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 DLK1P80370 383 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST2H2BEQ16778 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-202ENST00000372748 P4HA3Q7Z4N8 544 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 ZNF610Q8N9Z0 462 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 POC1BQ8TC44 478 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HAS2Q92819 552 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H2BHQ93079 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H2BNQ99877 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H2BMQ99879 126 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 SDHAF3Q9NRP4 125 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 HS3ST3B1Q9Y662 390 aa12.88□□□□□ -0.35
COL9A2-202ENST00000372748 CXorf65A6NEN9 183 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 ZNF726A6NNF4 738 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 CYB5BO43169 146 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 DHRS3O75911 302 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 TRGC2P03986 189 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 DUSP1P28562 367 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 MAS1LP35410 378 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 NKAIN1Q4KMZ8 207 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 LIAT1Q6ZQX7 453 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 SLC16A14Q7RTX9 510 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 CYB561D1Q8N8Q1 229 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 DECR2Q9NUI1 292 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 NECAP2Q9NVZ3 263 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 FAM230AA0A1W2PPH8 454 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 OR2J2O76002 312 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 SOD3P08294 240 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 ALDH3B1P43353 468 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 GRB2P62993 217 aaKnown RBP12.87□□□□□ -0.35
COL9A2-202ENST00000372748 RHBDD2Q6NTF9 364 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 SLC35G3Q8N808 338 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 LFNGQ8NES3 379 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 MSI2Q96DH6 328 aaKnown RBP12.87□□□□□ -0.35
COL9A2-202ENST00000372748 C18orf12Q96KH6 178 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 Q96M66 194 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 MAGT1Q9H0U3 335 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 PRDM13Q9H4Q3 707 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 METTL7AQ9H8H3 244 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 PARPBPQ9NWS1 579 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 CEP192Q8TEP8 1941 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 A0A1B0GV90 55 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 HSD17B6O14756 317 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 NXPH3O95157 252 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 GNMTQ14749 295 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 HIKESHIQ53FT3 197 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 SPSB3Q6PJ21 355 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 SLC22A25Q6T423 547 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 OR2AE1Q8NHA4 323 aa12.87□□□□□ -0.35
COL9A2-202ENST00000372748 BCAT2O15382 392 aaPredicted RBP12.86□□□□□ -0.35
COL9A2-202ENST00000372748 CLDN17P56750 224 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 IL13RA2Q14627 380 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 PLPPR5Q32ZL2 321 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 UNQ6494/PRO21346Q6UXR6 183 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 ZNF429Q86V71 674 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 TMEM217Q8N7C4 229 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 GALNT14Q96FL9 552 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 C14orf144Q96I85 54 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 BOD1Q96IK1 185 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 GPHA2Q96T91 129 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 AKIRIN1Q9H9L7 192 aaPredicted RBP12.86□□□□□ -0.35
COL9A2-202ENST00000372748 PISDQ9UG56 409 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 IGSF23A1L1A6 192 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 ZNF724A8MTY0 619 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 RUNX1Q01196 453 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 ARL6IP1Q15041 203 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 RSU1Q15404 277 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 C4orf17Q53FE4 359 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms