RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 RD3LP0DJH9 198 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 SOHLH1Q5JUK2 328 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 Q6ZSR3 168 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 KMT5CQ86Y97 462 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 LGI3Q8N145 548 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 SLC35G3Q8N808 338 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 FADS6Q8N9I5 356 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 SUMF1Q8NBK3 374 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 OR10AD1Q8NGE0 317 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 TMEM54Q969K7 222 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 OR6C1Q96RD1 312 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 SPSB2Q99619 263 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 MMP24Q9Y5R2 645 aa14.23□□□□□ -0.13
SDC4-201ENST00000372733 LOC102725191A0A1B0GVB3 256 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 DHHO43323 396 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 IGHV2-70P01814 119 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 S100PP25815 95 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 HIST1H3AP68431 136 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 HIST2H3PS2Q5TEC6 136 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 Q6ZPA2 131 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 HIST2H3AQ71DI3 136 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 RABEPKQ7Z6M1 372 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 BOD1Q96IK1 185 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 YPEL4Q96NS1 127 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 TP53RKQ96S44 253 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 BCL2L14Q9BZR8 327 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 HSF4Q9ULV5 492 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 FAM24AA6NFZ4 105 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 CEBPGP53567 150 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 STARD6P59095 220 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 SHBQ15464 509 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 SPTSSAQ969W0 71 aa14.22□□□□□ -0.13
SDC4-201ENST00000372733 IGKV1-12A0A0C4DH73 117 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 NPIPA2E9PIF3 369 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 NPIPA3F8WFD2 350 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 YIF1AO95070 293 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 IGKV1D-12P01611 117 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 NR2C1P13056 603 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 OMGP23515 440 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 H3F3AP84243 136 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 FOXL2NBQ6ZUU3 175 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 TMEM123Q8N131 208 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 OR4D5Q8NGN0 318 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 SPSB1Q96BD6 273 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 EML6Q6ZMW3 1958 aa14.21□□□□□ -0.13
SDC4-201ENST00000372733 IGSF23A1L1A6 192 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 ZNF727A8MUV8 499 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 SCRG1O75711 98 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 ONECUT2O95948 504 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 AADACP22760 399 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 RPS10P46783 165 aaKnown RBP14.21□□□□□ -0.14
SDC4-201ENST00000372733 WDR74Q6RFH5 385 aaPredicted RBP14.21□□□□□ -0.14
SDC4-201ENST00000372733 HEPN1Q6WQI6 88 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 ZNF574Q6ZN55 896 aaPredicted RBP14.21□□□□□ -0.14
SDC4-201ENST00000372733 FBXL14Q8N1E6 418 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 BATF2Q8N1L9 274 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 ZFP62Q8NB50 900 aaPredicted RBP14.21□□□□□ -0.14
SDC4-201ENST00000372733 LFNGQ8NES3 379 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 C10orf35Q96D05 121 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 DEFB126Q9BYW3 111 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 ULBP2Q9BZM5 246 aa14.21□□□□□ -0.14
SDC4-201ENST00000372733 CHCHD2Q9Y6H1 151 aaPredicted RBP14.21□□□□□ -0.14
SDC4-201ENST00000372733 NKX2-6A6NCS4 301 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 G3V3Y1 287 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 DKK1O94907 266 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 IFNA17P01571 189 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 CELA2AP08217 269 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 ATP6V0CP27449 155 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 RAB1AP62820 205 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 KIAA0141Q14154 515 aaPredicted RBP14.2□□□□□ -0.14
SDC4-201ENST00000372733 OR2G3Q8NGZ4 309 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 MOB3AQ96BX8 217 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 TMPRSS5Q9H3S3 457 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 GNMTQ14749 295 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 RAET1LQ5VY80 246 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 OR2C3Q8N628 320 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 BORCS8Q96FH0 119 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 ANGPTL4Q9BY76 406 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 ZNF286AQ9HBT8 521 aa14.2□□□□□ -0.14
SDC4-201ENST00000372733 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 HERV-K104P61576 105 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 HAGHQ16775 308 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 ZNF774Q6NX45 483 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 MR1Q95460 341 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 MUCL1Q96DR8 90 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 JSRP1Q96MG2 331 aaPredicted RBP14.19□□□□□ -0.14
SDC4-201ENST00000372733 ZNF724A8MTY0 619 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 SLC33A1O00400 549 aaPredicted RBP14.19□□□□□ -0.14
SDC4-201ENST00000372733 CRYGSP22914 178 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 ZNF343Q6P1L6 599 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 SPSB3Q6PJ21 355 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 TMEM171Q8WVE6 324 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 SYT3Q9BQG1 590 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 GGACTQ9BVM4 153 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 ZNF700Q9H0M5 742 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 MAGT1Q9H0U3 335 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 AKIRIN1Q9H9L7 192 aaPredicted RBP14.19□□□□□ -0.14
SDC4-201ENST00000372733 TMED3Q9Y3Q3 217 aa14.19□□□□□ -0.14
SDC4-201ENST00000372733 RBFOX3A6NFN3 312 aa14.18□□□□□ -0.14
SDC4-201ENST00000372733 IFITM10A6NMD0 228 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms