RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 MESTQ5EB52 335 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 FFAR4Q5NUL3 377 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 OR10D4PQ8NGN7 298 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 SCMH1Q96GD3 660 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 PLA2G3Q9NZ20 509 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 LSM2Q9Y333 95 aaKnown RBP10.13□□□□□ -0.79
PTPRF-203ENST00000372407 SERTM2A0A1B0GWG4 89 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 CALCRP30988 508 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 NXPH1P58417 271 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 STUMQ69YW2 141 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 SEZ6L2Q6UXD5 910 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 SSX7Q7RTT5 188 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 OR8B12Q8NGG6 310 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 OR10V1Q8NGI7 309 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 ZNF107Q9UII5 783 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-203ENST00000372407 OR2M5A3KFT3 312 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 SPRY3O43610 288 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 GZMMP51124 257 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 SNRPEP62304 92 aaKnown RBP10.12□□□□□ -0.79
PTPRF-203ENST00000372407 TRIP11Q15643 1979 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 MOGAT2Q3SYC2 334 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 SLC24A4Q8NFF2 622 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 OR2Z1Q8NG97 314 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 DOCK5Q9H7D0 1870 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 FCGR3BO75015 233 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 WISP3O95389 354 aaPredicted RBP10.12□□□□□ -0.79
PTPRF-203ENST00000372407 VAMP3Q15836 100 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 ETV3LQ6ZN32 361 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 LIAT1Q6ZQX7 453 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 NRTNQ99748 197 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 MRPS18AQ9NVS2 196 aaKnown RBP10.12□□□□□ -0.79
PTPRF-203ENST00000372407 ZMIZ1Q9ULJ6 1067 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 GREB1LQ9C091 1923 aaPredicted RBP10.12□□□□□ -0.79
PTPRF-203ENST00000372407 IGHV1OR15-9A0A0B4J2B8 117 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 EPOPA6NHQ4 379 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 CRYABP02511 175 aaKnown RBP10.12□□□□□ -0.79
PTPRF-203ENST00000372407 ZNF79Q15937 498 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 TMEM91Q6ZNR0 172 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 CXorf67Q86X51 503 aaPredicted RBP10.12□□□□□ -0.79
PTPRF-203ENST00000372407 C1orf210Q8IVY1 113 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 OR5M9Q8NGP3 310 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 OR10AC1Q8NH08 325 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 NTMQ9P121 344 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 RNF24Q9Y225 148 aa10.12□□□□□ -0.79
PTPRF-203ENST00000372407 TMEM218A2RU14 115 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 J3QR89 54 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 NDUFB3O43676 98 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 PATE4P0C8F1 98 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 MDH2P40926 338 aaKnown RBP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 TMEM267Q0VDI3 215 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 IL24Q13007 206 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 FAM210BQ96KR6 192 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 PSG11Q9UQ72 335 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 TRAPPC1Q9Y5R8 145 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 MPC1Q9Y5U8 109 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 TOX3O15405 576 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 CELA2BP08218 269 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 FABP4P15090 132 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 VDAC1P21796 283 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 POLR2GP62487 172 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 LSM11P83369 360 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 CLEC18BQ6UXF7 455 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 NUFIP2Q7Z417 695 aaKnown RBP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 ZAR1Q86SH2 424 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 LYG1Q8N1E2 194 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 C9orf62Q8N4C0 152 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 SLC52A3Q9NQ40 469 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 TIMM9Q9Y5J7 89 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 CKAP5Q14008 2032 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 SCN3AQ9NY46 2000 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 DOPEY2Q9Y3R5 2298 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 TRGV8A0A0C4DH27 118 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 CYR61O00622 381 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 EPHA8P29322 1005 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 CD200P41217 278 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 OR5I1Q13606 314 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 IQCJQ1A5X6 159 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 LRRC10Q5BKY1 277 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 TRAT1Q6PIZ9 186 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 RPS4Y2Q8TD47 263 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 SARGQ9BW04 601 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 ZDBF2Q9HCK1 2354 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 TNFSF14O43557 240 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 MMP16P51512 607 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 ATP6V1FQ16864 119 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 RASL10BQ96S79 203 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 PECRQ9BY49 303 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 SLC45A2Q9UMX9 530 aa10.11□□□□□ -0.79
PTPRF-203ENST00000372407 BRCA1P38398 1863 aaKnown RBP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 EP300Q09472 2414 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-203ENST00000372407 PLXNA1Q9UIW2 1896 aa10.1□□□□□ -0.79
PTPRF-203ENST00000372407 LOC102723971A0A1B0GUV8 181 aa10.1□□□□□ -0.79
PTPRF-203ENST00000372407 LIPT2A6NK58 231 aa10.1□□□□□ -0.79
PTPRF-203ENST00000372407 SOCS1O15524 211 aa10.1□□□□□ -0.79
PTPRF-203ENST00000372407 PAX6P26367 422 aa10.1□□□□□ -0.79
PTPRF-203ENST00000372407 GALNSP34059 522 aa10.1□□□□□ -0.79
PTPRF-203ENST00000372407 ZNF766Q5HY98 468 aa10.1□□□□□ -0.79
PTPRF-203ENST00000372407 STPG2Q8N412 459 aa10.1□□□□□ -0.79
PTPRF-203ENST00000372407 ASB10Q8WXI3 467 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms