RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CES1P1Q9UKY3 287 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 ZNF346Q9UL40 294 aaKnown RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 CTSCP53634 463 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 ELFN2Q5R3F8 820 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 ZNF683Q8IZ20 524 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 FBXL6Q8N531 539 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 ZNF250P15622 560 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 EPHA8P29322 1005 aaPredicted RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 CDKN3Q16667 212 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 COX19Q49B96 90 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 NUFIP2Q7Z417 695 aaKnown RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 MRGPREQ86SM8 312 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 KHDC3LQ587J8 217 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 FUNDC1Q8IVP5 155 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 OR10V1Q8NGI7 309 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 A4GNTQ9UNA3 340 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM265A0A087WTH1 108 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 TRGV10A0A0A0MS01 117 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 A0A1W2PPC4 97 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 SLC35B1P78383 322 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 NKAIN2Q5VXU1 208 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 LYPD8Q6UX82 237 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM183AQ8IXX5 376 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 OR2C3Q8N628 320 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 PEF1Q9UBV8 284 aaKnown RBP13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 TRAV8-7A0A075B6U6 113 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 PTX4Q96A99 478 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 HSPB2A8KAH6 182 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 SCRG1O75711 98 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 IL4P05112 153 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 ZNF735P0CB33 412 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 APOBEC1P41238 236 aaKnown RBP13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 PNLIPRP2P54317 469 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 HSPB2Q16082 182 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 TCTN1Q2MV58 587 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 J3KRW8 73 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 IL13RA2Q14627 380 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM65Q6PI78 240 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 OPN3Q9H1Y3 402 aaPredicted RBP13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 TIMM10BQ9Y5J6 103 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 RELBQ01201 579 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 TAZQ16635 292 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 KTI12Q96EK9 354 aaPredicted RBP13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 CDX2Q99626 313 aaPredicted RBP13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 SLCO1C1Q9NYB5 712 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 LRRC37A3O60309 1634 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 FAHP16930 419 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 MGAT2Q10469 447 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 IL17CQ9P0M4 197 aa13.73□□□□□ -0.21
GTF3C4-201ENST00000372146 M0R296 226 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 CDK2AP1O14519 115 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 RIPPLY3P57055 190 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 C9orf62Q8N4C0 152 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 IGHV4-34P06331 123 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 DCDP81605 110 aaKnown RBP13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 PRDX1Q06830 199 aaKnown RBP13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 DLEU7Q6UYE1 221 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 DMRT1Q9Y5R6 373 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 CKS1BP61024 79 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 RPS4Y2Q8TD47 263 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 RHNO1Q9BSD3 238 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 MARVELD1Q9BSK0 173 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 IER2Q9BTL4 223 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 GGACTQ9BVM4 153 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM167BQ9NRX6 74 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 TNFSF11O14788 317 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 TAPBPO15533 448 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 GCSAMLQ5JQS6 135 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 ATOH7Q8N100 152 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 ARHGAP5-AS1Q96IT6 56 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 ASB16Q96NS5 453 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 TPSD1Q9BZJ3 242 aa13.72□□□□□ -0.21
GTF3C4-201ENST00000372146 PRSS37A4D1T9 235 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 CD74P04233 296 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 SAPCD1Q5SSQ6 148 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 IGSF21Q96ID5 467 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 FZD2Q14332 565 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 PMCHL1Q16048 86 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 OR5M9Q8NGP3 310 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 DUSP23Q9BVJ7 150 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 DEFB108AA8MXU0 73 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 KLF3P57682 345 aaPredicted RBP13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 SLC35E3Q7Z769 313 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 DEFB108BQ8NET1 73 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 PDLIM5Q96HC4 596 aaKnown RBP13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 PSG5Q15238 335 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 SLC25A34Q6PIV7 304 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 NIT1Q86X76 327 aa13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.71□□□□□ -0.21
GTF3C4-201ENST00000372146 S1PR5Q9H228 398 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 ZBTB42B2RXF5 422 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 TRGC2P03986 189 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 RPL18Q07020 188 aaKnown RBP13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 TMEM179BQ7Z7N9 219 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 WDFY1Q8IWB7 410 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 OR1P1Q8NH06 330 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 ZMIZ1Q9ULJ6 1067 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 KCNK7Q9Y2U2 307 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 M0R1B8 84 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms