RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 F2RL2O00254 374 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 TO15178 435 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 OR4A8P0C604 315 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 MRPS11P82912 194 aaKnown RBP12.95□□□□□ -0.34
NDC1-201ENST00000371429 RNF133Q8WVZ7 376 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 MARC2Q969Z3 335 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 FOXJ2Q9P0K8 574 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 ACP1P24666 158 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 SSX1Q16384 188 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 TOR2AQ5JU69 321 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 DMKNQ6E0U4 476 aaPredicted RBP12.95□□□□□ -0.34
NDC1-201ENST00000371429 TMEM105Q8N8V8 129 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 PPP1R1CQ8WVI7 109 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 OR2J1Q9GZK6 312 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 ZNF665Q9H7R5 613 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 THYN1Q9P016 225 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 PYCARD-AS1I3L0S3 204 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 HAND1O96004 215 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 C1QBP02746 253 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 COX6A1P12074 109 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 ASCL1P50553 236 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 MPPED2Q15777 294 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 OR52B4Q8NGK2 314 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 HGDQ93099 445 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 LPAR2Q9HBW0 351 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.95□□□□□ -0.34
NDC1-201ENST00000371429 KRBOX1C9JBD0 128 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 CST7O76096 145 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 GPR6P46095 362 aaPredicted RBP12.95□□□□□ -0.34
NDC1-201ENST00000371429 HLXQ14774 488 aaPredicted RBP12.95□□□□□ -0.34
NDC1-201ENST00000371429 OXA1LQ15070 435 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 TIGITQ495A1 244 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 DBX2Q6ZNG2 339 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 SLC26A10Q8NG04 563 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 MAP6Q96JE9 813 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 WDR13Q9H1Z4 485 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 FRRS1LQ9P0K9 344 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 MTFP1Q9UDX5 166 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 RCL1Q9Y2P8 373 aaKnown RBP12.95□□□□□ -0.34
NDC1-201ENST00000371429 TIMM9Q9Y5J7 89 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 SPTBP11277 2137 aa12.95□□□□□ -0.34
NDC1-201ENST00000371429 LOC101059948A0A1B0GTJ6 334 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 PRF1P14222 555 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 LSM11P83369 360 aaKnown RBP eCLIP12.94□□□□□ -0.34
NDC1-201ENST00000371429 DPF1Q92782 380 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 MISP3Q96FF7 219 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 SPSB2Q99619 263 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 SLC7A10Q9NS82 523 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 RNF24Q9Y225 148 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 RTTNQ86VV8 2226 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 ZNF785A8K8V0 405 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 PARP14Q460N5 1801 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 VWCEQ96DN2 955 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 CTSBP07858 339 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 TAGLN2P37802 199 aaKnown RBP12.94□□□□□ -0.34
NDC1-201ENST00000371429 OPRK1P41145 380 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 TMEM123Q8N131 208 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 SPICQ8N5J4 248 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 BPIFCQ8NFQ6 507 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 OR5A2Q8NGI9 324 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 SLC52A3Q9NQ40 469 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 PRSS23O95084 383 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 GZMHP20718 246 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 FGF7P21781 194 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 CCL8P80075 99 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 ASCL5Q7RTU5 278 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 CADM3Q8N126 398 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 ADTRPQ96IZ2 230 aa12.94□□□□□ -0.34
NDC1-201ENST00000371429 TGM1P22735 817 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 ZNF239Q16600 458 aaKnown RBP12.93□□□□□ -0.34
NDC1-201ENST00000371429 FAM27BQ5VT28 67 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 TMEM65Q6PI78 240 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 OR4F5Q8NH21 305 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 WNT2BQ93097 391 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 OR4F4Q96R69 305 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 TXN2Q99757 166 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 SEBOXQ9HB31 216 aaPredicted RBP12.93□□□□□ -0.34
NDC1-201ENST00000371429 ATPIF1Q9UII2 106 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 ACSM6Q6P461 480 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 ZDHHC22Q8N966 263 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 FKBP11Q9NYL4 201 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 TMED3Q9Y3Q3 217 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 MYOFQ9NZM1 2061 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 A0A1W2PN81 502 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 TIAF1O95411 115 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 FGF2P09038 288 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 CTSSP25774 331 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 CHRNA7P36544 502 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 HAGHQ16775 308 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 SLC25A30Q5SVS4 291 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 XAF1Q6GPH4 301 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 OR5AP2Q8NGF4 316 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 OGG1O15527 345 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 KIR2DS2P43631 304 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 MMP16P51512 607 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 PCOLCEQ15113 449 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 CLEC2AQ6UVW9 174 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 CCDC190Q86UF4 302 aa12.93□□□□□ -0.34
NDC1-201ENST00000371429 PATZ1Q9HBE1 687 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms