RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 M0R143 59 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 F12P00748 615 aaPredicted RBP15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 NGFP01138 241 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 ZNF660Q6AZW8 331 aaPredicted RBP15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 PMS2P1A4D2B8 440 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 PNPP00491 289 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 CYC1P08574 325 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 C16orf47Q6ZP98 133 aaPredicted RBP15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 SLC26A10Q8NG04 563 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 NRIP2Q9BQI9 281 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 OCIAD1Q9NX40 245 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 TAAR3PQ9P1P4 343 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 YTHDF2Q9Y5A9 579 aaKnown RBP15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 M0R1X1 148 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 LIMS1P48059 325 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 NAAAQ02083 359 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 GUCA2BQ16661 112 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 ZNF362Q5T0B9 420 aaPredicted RBP15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 TCTEX1D1Q8N7M0 179 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 BOD1Q96IK1 185 aa15.17■□□□□ 0.02
PTP4A1-201ENST00000370651 LY86O95711 162 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 OR6X1Q8NH79 312 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 ATP5SQ99766 215 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 ZMIZ1Q9ULJ6 1067 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 SOX15O60248 233 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 SEC11BP0C7V7 166 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 LGALS4P56470 323 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 GNB1P62873 340 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 WIPI1Q5MNZ9 446 aaPredicted RBP15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 GTF2H5Q6ZYL4 71 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 MYPOPQ86VE0 399 aaPredicted RBP15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 ZNRF4Q8WWF5 429 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 POM121L2Q96KW2 1035 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 SIRT7Q9NRC8 400 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 GGTLC2Q14390 218 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 TRIB1Q96RU8 372 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 MCM3APO60318 1980 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 SEC16AO15027 2179 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 CENPVL1A0A0U1RR11 272 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 H3BQ15 152 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 SPINK4O60575 86 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 CLEC3BP05452 202 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 VDAC1P21796 283 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 NUFIP2Q7Z417 695 aaKnown RBP15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 TBC1D26Q86UD7 250 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 OR10A7Q8NGE5 316 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 ACY3Q96HD9 319 aa15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 ESRP2Q9H6T0 727 aaKnown RBP15.16■□□□□ 0.02
PTP4A1-201ENST00000370651 CYR61O00622 381 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 PABPC1L2AQ5JQF8 200 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 ZNF383Q8NA42 475 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 LOC102723971A0A1B0GUV8 181 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 MFSD2BA6NFX1 497 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 CCKARP32238 428 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 ATP6V1FQ16864 119 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 PUSL1Q8N0Z8 303 aaKnown RBP15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 PRSS27Q9BQR3 290 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 TMEM147Q9BVK8 224 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 PRSS50Q9UI38 385 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 CES1P1Q9UKY3 287 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 STARD10Q9Y365 291 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 TOX3O15405 576 aaPredicted RBP15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 CHST1O43916 411 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 GLULP15104 373 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 FZD5Q13467 585 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 OR11H4Q8NGC9 324 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 RGP1Q92546 391 aaPredicted RBP15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 A0A1W2PQD3 144 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 FBP1P09467 338 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 RFLNBQ8N5W9 214 aa15.15■□□□□ 0.02
PTP4A1-201ENST00000370651 TRAV34A0A0B4J273 112 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 SYNGR2O43760 224 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 YIF1AO95070 293 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 PTBP3O95758 552 aaKnown RBP15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 HLA-GP17693 338 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 FAM219AQ8IW50 185 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 PLPPR2Q96GM1 343 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 SLC2A9Q9NRM0 540 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 SLC22A20A6NK97 555 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 FAM74A7A6NL05 159 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 HRKO00198 91 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 HEXAP06865 529 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 MMP16P51512 607 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 EWSR1Q01844 656 aaKnown RBP eCLIP15.14■□□□□ 0.012e-7■■■■■ 30.5
PTP4A1-201ENST00000370651 SKP2Q13309 424 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 FAM74A3Q4VXF1 159 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 ZPLD1Q8TCW7 415 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 MARVELD3Q96A59 401 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 ZXDAP98168 799 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 ANKRD37Q7Z713 158 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 ZNF596Q8TC21 504 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 PTX4Q96A99 478 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 IP6K3Q96PC2 410 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 PHF7Q9BWX1 381 aaPredicted RBP15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 ZFP64Q9NPA5 681 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 KLK13Q9UKR3 277 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 GNG4P50150 75 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 PTTG1IPP53801 180 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 PAX5Q02548 391 aa15.14■□□□□ 0.01
PTP4A1-201ENST00000370651 MPV17LQ2QL34 196 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms