RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 LIMS3P0CW19 117 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 LIMS4P0CW20 117 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 IGHV4-31P0DP07 118 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 SLC2A1P11166 492 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 PIPP12273 146 aaPredicted RBP6.49□□□□□ -1.37
YBX3-204ENST00000366290 ALDH3B1P43353 468 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 MMP15P51511 669 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 PRKXP51817 358 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 ZNF121P58317 390 aaPredicted RBP6.49□□□□□ -1.37
YBX3-204ENST00000366290 BRWD1-AS2P59051 145 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 GRB2P62993 217 aaKnown RBP6.49□□□□□ -1.37
YBX3-204ENST00000366290 SLC35A2P78381 396 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 MFGE8Q08431 387 aaPredicted RBP6.49□□□□□ -1.37
YBX3-204ENST00000366290 DEGS2Q6QHC5 323 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 ARL9Q6T311 187 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 PLEKHG7Q6ZR37 379 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 ZNF679Q8IYX0 411 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 ACBD7Q8N6N7 88 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 ZNF485Q8NCK3 441 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 BPIFB6Q8NFQ5 453 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 OR5R1Q8NH85 324 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 KLF14Q8TD94 323 aaPredicted RBP6.49□□□□□ -1.37
YBX3-204ENST00000366290 ASB17Q8WXJ9 295 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 ZNF479Q96JC4 524 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 COPS4Q9BT78 406 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 BPESC1Q9GZL8 116 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 DUSP21Q9H596 190 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 ELOVL3Q9HB03 270 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 FAM206AQ9NX38 181 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 CNOT2Q9NZN8 540 aaKnown RBP6.49□□□□□ -1.37
YBX3-204ENST00000366290 EIF3KQ9UBQ5 218 aaKnown RBP6.49□□□□□ -1.37
YBX3-204ENST00000366290 CLEC2DQ9UHP7 191 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 STARD10Q9Y365 291 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 GRIP1Q9Y3R0 1128 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 LRRC42Q9Y546 428 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 TMEM14AQ9Y6G1 99 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 A0A1W2PPW3 197 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 PHYHO14832 338 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ZNF254O75437 659 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 SULT1C4O75897 302 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 HTR1AP08908 422 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 H2BFMP0C1H6 154 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 CCDC159P0C7I6 412 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 KITLGP21583 273 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ACHEP22303 614 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 CRHBPP24387 322 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 DCKP27707 260 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ATP6V1E1P36543 226 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 MPV17P39210 176 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 CX3CR1P49238 355 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ETV1P50549 477 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 TMEM33P57088 247 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 OR12D2P58182 307 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 PPP1CBP62140 327 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ACTC1P68032 377 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ACTA1P68133 377 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ST3GAL4Q11206 333 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ALKBH6Q3KRA9 238 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ZNF718Q3SXZ3 478 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 TP53I3Q53FA7 332 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 KLHL22Q53GT1 634 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 SPATA46Q5T0L3 261 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 LIPNQ5VXI9 398 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 CYB5R2Q6BCY4 276 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 DRAM2Q6UX65 266 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 AHSA2Q719I0 299 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 KRT77Q7Z794 578 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 LHFPL3Q86UP9 236 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 OR8B12Q8NGG6 310 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 OR1J1Q8NGS3 322 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 THAP6Q8TBB0 222 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 SLC25A40Q8TBP6 338 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 RDH5Q92781 318 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 SPTSSAQ969W0 71 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 GFI1Q99684 422 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 OR2J1Q9GZK6 312 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 ISG20L2Q9H9L3 353 aaKnown RBP6.48□□□□□ -1.37
YBX3-204ENST00000366290 ACOXLQ9NUZ1 547 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 TAAR3PQ9P1P4 343 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 IKZF2Q9UKS7 526 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 FZR1Q9UM11 496 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 DIMT1Q9UNQ2 313 aaKnown RBP6.48□□□□□ -1.37
YBX3-204ENST00000366290 PCDHGB1Q9Y5G3 927 aa6.48□□□□□ -1.37
YBX3-204ENST00000366290 A0A1B0GWJ7 208 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 DAPL1A0PJW8 107 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 EFCAB10A6NFE3 127 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 METTL15A6NJ78 407 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 E9PI62 339 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 FADS2O95864 444 aaKnown RBP6.47□□□□□ -1.37
YBX3-204ENST00000366290 LALBAP00709 142 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 IGLV3-1P01715 115 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 CDK1P06493 297 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 CD55P08174 381 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 COL8A2P25067 703 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 HSD11B1P28845 292 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 CRYBB2P43320 205 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 RGS6P49758 472 aa6.47□□□□□ -1.37
YBX3-204ENST00000366290 RIDAP52758 137 aaKnown RBP6.47□□□□□ -1.37
YBX3-204ENST00000366290 SEC61A1P61619 476 aaKnown RBP6.47□□□□□ -1.37
YBX3-204ENST00000366290 CSNK2BP67870 215 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms