RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MELTFP08582 738 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 RAE1P78406 368 aaKnown RBP14.27□□□□□ -0.13
COL18A1-203ENST00000359759 NEIL1Q96FI4 390 aaPredicted RBP14.27□□□□□ -0.13
COL18A1-203ENST00000359759 TRAF4Q9BUZ4 470 aaPredicted RBP14.27□□□□□ -0.13
COL18A1-203ENST00000359759 MFNGO00587 321 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 IGF2P01344 180 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 RPL30P62888 115 aaKnown RBP14.26□□□□□ -0.13
COL18A1-203ENST00000359759 XAF1Q6GPH4 301 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 SLC36A1Q7Z2H8 476 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 SFTPA2Q8IWL1 248 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 SFTPA1Q8IWL2 248 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 AURKAIP1Q9NWT8 199 aaPredicted RBP14.26□□□□□ -0.13
COL18A1-203ENST00000359759 AMDHD2Q9Y303 409 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 SHROOM3Q8TF72 1996 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 TMEM251Q8N6I4 163 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 SPACA9Q96E40 222 aaPredicted RBP14.26□□□□□ -0.13
COL18A1-203ENST00000359759 TMEFF2Q9UIK5 374 aaPredicted RBP14.26□□□□□ -0.13
COL18A1-203ENST00000359759 DOT1LQ8TEK3 1739 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 LEUTXA8MZ59 168 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 ZNF137PP52743 207 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 LIAT1Q6ZQX7 453 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 OR2T10Q8NGZ9 312 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 VN1R17PQ8TDU5 208 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 C5P01031 1676 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 DHRS3O75911 302 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 OR3A1P47881 315 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 PSG5Q15238 335 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 OR4P4Q8NGL7 312 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 NT5CQ8TCD5 201 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 TMEM191AQ9H0A3 160 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 ASPDHA6ND91 283 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 H7C2G1 150 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 LYZL6O75951 148 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 IL13RA2Q14627 380 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 RBPMS2Q6ZRY4 209 aaKnown RBP14.26□□□□□ -0.13
COL18A1-203ENST00000359759 TMEM174Q8WUU8 243 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 SPSB1Q96BD6 273 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 OR4C12Q96R67 309 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 TIAM2Q8IVF5 1701 aa14.26□□□□□ -0.13
COL18A1-203ENST00000359759 C11orf94C9JXX5 98 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 HERVK_113P61574 105 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 CLEC1BQ9P126 229 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 MTFP1Q9UDX5 166 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 CEACAM5P06731 702 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 SSMEM1Q8WWF3 244 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 ZPBPQ9BS86 351 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 TEX101Q9BY14 249 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 PECRQ9BY49 303 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 MTCH2Q9Y6C9 303 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 TNFRSF1AP19438 455 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 PRSS54Q6PEW0 395 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 TDHQ8IZJ6 230 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 ZFPL1O95159 310 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 ZNF205O95201 554 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 RPS4Y1P22090 263 aaKnown RBP14.25□□□□□ -0.13
COL18A1-203ENST00000359759 TMEM204Q9BSN7 226 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 SIGLEC7Q9Y286 467 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 KIR2DS2P43631 304 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 CST9Q5W186 159 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 Q8IYB0 196 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 A0A1W2PN81 502 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 EDIL3O43854 480 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 BSXQ3C1V8 233 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 OR2D3Q8NGH3 330 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 FKBP11Q9NYL4 201 aa14.25□□□□□ -0.13
COL18A1-203ENST00000359759 TECRQ9NZ01 308 aaKnown RBP14.25□□□□□ -0.13
COL18A1-203ENST00000359759 ZNF32P17041 273 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 MS4A7Q9GZW8 240 aaPredicted RBP14.24□□□□□ -0.13
COL18A1-203ENST00000359759 A0A0B4J2E0 115 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 A0A1B0GX12 115 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 PLPP2O43688 288 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 P01737 135 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 UQCRFS1P47985 274 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 COMPP49747 757 aaPredicted RBP14.24□□□□□ -0.13
COL18A1-203ENST00000359759 ZNF766Q5HY98 468 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 PABPC1L2AQ5JQF8 200 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 ACP1P24666 158 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 FOXC1Q12948 553 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 C17orf47Q8NEP4 570 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 OR10G8Q8NGN5 311 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 TMSB15BA0A087X1C1 80 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 LINC01565O15544 149 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 IER3P46695 156 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 TNFAIP6P98066 277 aaPredicted RBP14.24□□□□□ -0.13
COL18A1-203ENST00000359759 GABRA6Q16445 453 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 OR5AU1Q8NGC0 362 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 GRAMD2BQ96HH9 432 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 MMP25Q9NPA2 562 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 MANBALQ9NQG1 85 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 PRSS50Q9UI38 385 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 KDM3BQ7LBC6 1761 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 WFDC3Q8IUB2 231 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 ZNF547Q8IVP9 402 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 SPICQ8N5J4 248 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 AMER3Q8N944 861 aa14.24□□□□□ -0.13
COL18A1-203ENST00000359759 ELOA3CA0A087WX78 387 aaPredicted RBP14.23□□□□□ -0.13
COL18A1-203ENST00000359759 C16orf47Q6ZP98 133 aaPredicted RBP14.23□□□□□ -0.13
COL18A1-203ENST00000359759 DOLPP1Q86YN1 238 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 ANAPC16Q96DE5 110 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 STARD4Q96DR4 205 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms