RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 SORDQ00796 357 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 RBM39Q14498 530 aaKnown RBP11.49□□□□□ -0.57
CCDC197-201ENST00000359253 METTL11BQ5VVY1 283 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 TMEM17Q86X19 198 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 FAM58AQ8N1B3 248 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 BPIFB2Q8N4F0 458 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 OR4K15Q8NH41 348 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 EMG1Q92979 244 aaKnown RBP11.49□□□□□ -0.57
CCDC197-201ENST00000359253 RNASE6Q93091 150 aaKnown RBP11.49□□□□□ -0.57
CCDC197-201ENST00000359253 FBXW5Q969U6 566 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 SLAMF9Q96A28 289 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 SCGB3A2Q96PL1 93 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 PSMG3-AS1Q96PY0 264 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 ZNF442Q9H7R0 627 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 GPN1Q9HCN4 374 aaPredicted RBP11.49□□□□□ -0.57
CCDC197-201ENST00000359253 MYOZ1Q9NP98 299 aaPredicted RBP11.49□□□□□ -0.57
CCDC197-201ENST00000359253 NDRG3Q9UGV2 375 aa11.49□□□□□ -0.57
CCDC197-201ENST00000359253 TRAV6A0A075B6T7 132 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 MEIS3P1A6NDR6 274 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 CLDN14O95500 239 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 PTBP3O95758 552 aaKnown RBP11.48□□□□□ -0.57
CCDC197-201ENST00000359253 AMY2AP04746 511 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 CD200P41217 278 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 ECI1P42126 302 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 NPBWR2P48146 333 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 ERVK11-1P61568 191 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 GRK1Q15835 563 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 SPIN3Q5JUX0 258 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 SIGIRRQ6IA17 410 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 C6orf201Q7Z4U5 140 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 GLCCI1Q86VQ1 547 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 SCCPDHQ8NBX0 429 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 OR10AD1Q8NGE0 317 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 OR51S1Q8NGJ8 323 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 CA5BP1Q8WTZ4 195 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 CCDC107Q8WV48 283 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 CMSS1Q9BQ75 279 aaKnown RBP11.48□□□□□ -0.57
CCDC197-201ENST00000359253 GINS4Q9BRT9 223 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 ESRP2Q9H6T0 727 aaKnown RBP11.48□□□□□ -0.57
CCDC197-201ENST00000359253 RCC2Q9P258 522 aaKnown RBP11.48□□□□□ -0.57
CCDC197-201ENST00000359253 GLS2Q9UI32 602 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 ELF5Q9UKW6 265 aaPredicted RBP11.48□□□□□ -0.57
CCDC197-201ENST00000359253 ALG5Q9Y673 324 aa11.48□□□□□ -0.57
CCDC197-201ENST00000359253 PLSCR5A0PG75 271 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 SNRPGP15A8MWD9 76 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 MCRIP1C9JLW8 97 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 H7C1Q1 480 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 SYNGR1O43759 233 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 OR7C1O76099 320 aaPredicted RBP11.47□□□□□ -0.57
CCDC197-201ENST00000359253 FCER2P06734 321 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 ZNF735P0CB33 412 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 PGA5P0DJD9 388 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 AMY2BP19961 511 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 CFHR2P36980 270 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 OR3A3P47888 321 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 SNU13P55769 128 aaKnown RBP11.47□□□□□ -0.57
CCDC197-201ENST00000359253 ZNF154Q13106 437 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 CDK10Q15131 360 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 ALKBH6Q3KRA9 238 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 PIGYQ3MUY2 71 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 NKAPLQ5M9Q1 402 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 CD276Q5ZPR3 534 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 IDO2Q6ZQW0 420 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 Q6ZS49 121 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 ZDHHC22Q8N966 263 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 POC1AQ8NBT0 407 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 BEST4Q8NFU0 473 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 OR5H2Q8NGV7 314 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 OR10Z1Q8NGY1 313 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 TMEM171Q8WVE6 324 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 DIRC2Q96SL1 478 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 NRIP2Q9BQI9 281 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 GHITMQ9H3K2 345 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 SEBOXQ9HB31 216 aaPredicted RBP11.47□□□□□ -0.57
CCDC197-201ENST00000359253 RASL12Q9NYN1 266 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 TREM2Q9NZC2 230 aa11.47□□□□□ -0.57
CCDC197-201ENST00000359253 DIDO1Q9BTC0 2240 aaKnown RBP11.47□□□□□ -0.57
CCDC197-201ENST00000359253 TENM4Q6N022 2769 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 MLNRO43193 412 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 CCNKO75909 580 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 THBDP07204 575 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 PRKACAP17612 351 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 HRH1P35367 487 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 MDH2P40926 338 aaKnown RBP11.46□□□□□ -0.57
CCDC197-201ENST00000359253 RRAS2P62070 204 aaPredicted RBP11.46□□□□□ -0.57
CCDC197-201ENST00000359253 ZNF146Q15072 292 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 SHEQ5VZ18 495 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 WFDC8Q8IUA0 241 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 GVQW1Q8N7I0 195 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 OR5AP2Q8NGF4 316 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 HPS1Q92902 700 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 SNAPC3Q92966 411 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 DVL3Q92997 716 aaPredicted RBP11.46□□□□□ -0.57
CCDC197-201ENST00000359253 ERGIC1Q969X5 290 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 MRPL24Q96A35 216 aaKnown RBP11.46□□□□□ -0.57
CCDC197-201ENST00000359253 FAAP24Q9BTP7 215 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 TINAGL1Q9GZM7 467 aaPredicted RBP11.46□□□□□ -0.57
CCDC197-201ENST00000359253 KCNJ16Q9NPI9 418 aa11.46□□□□□ -0.57
CCDC197-201ENST00000359253 C12orf4Q9NQ89 552 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms