RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CDC40O60508 579 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 TUBG1P23258 451 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 GFERP55789 205 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ENDOGQ14249 297 aaKnown RBP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 SLC22A6Q4U2R8 563 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 TOMM20LQ6UXN7 152 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 KLHDC8AQ8IYD2 350 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 SAXO1Q8IYX7 474 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 COX18Q8N8Q8 333 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 GPR119Q8TDV5 335 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 TMEM37Q8WXS4 190 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 BCL2L2Q92843 193 aaPredicted RBP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 MS4A6EQ96DS6 147 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 WFDC1Q9HC57 220 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 TUBG2Q9NRH3 451 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 SLC2A9Q9NRM0 540 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZNF701Q9NV72 531 aaPredicted RBP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 KLHL28Q9NXS3 571 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 RFNGQ9Y644 331 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 KIF26BQ2KJY2 2108 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 CYB5AP00167 134 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 PRH1P02810 166 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 CFIP05156 583 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZNF708P17019 499 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 RPL12P30050 165 aaKnown RBP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 TPTE2P1Q5T6R2 138 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 C1orf189Q5VU69 101 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 C9orf40Q8IXQ3 194 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZNF738Q8NE65 137 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 AQP3Q92482 292 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 PRRT1Q99946 306 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 CABLES2Q9BTV7 478 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 MAGT1Q9H0U3 335 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZNF552Q9H707 407 aaPredicted RBP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZNF703Q9H7S9 590 aaPredicted RBP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 SIRT3Q9NTG7 399 aaPredicted RBP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ST3GAL6Q9Y274 331 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 CLDN34H7C241 214 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 STK17BO94768 372 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 CD1AP06126 327 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 FBXO45P0C2W1 286 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZFP36L1Q07352 338 aaKnown RBP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 FUT5Q11128 374 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZIC1Q15915 447 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 C2orf76Q3KRA6 126 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZNF550Q7Z398 422 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 SYS1Q8N2H4 156 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 FAM89BQ8N5H3 189 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 TMEM156Q8N614 296 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 MOB3AQ96BX8 217 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 BPIFA2Q96DR5 249 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 SMIM12Q96EX1 92 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 NIPSNAP3BQ9BS92 247 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 MS4A8Q9BY19 250 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 CMC2Q9NRP2 79 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 PLSCR4Q9NRQ2 329 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 LIPGQ9Y5X9 500 aa8.16□□□□□ -1.1
SMARCAL1-202ENST00000358207 GPRIN2O60269 458 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 MANFP55145 182 aaKnown RBP8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 HLA-DRB3P79483 266 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 SPSB3Q6PJ21 355 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 ERASQ7Z444 233 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 SELENOHQ8IZQ5 122 aaKnown RBP8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZDHHC22Q8N966 263 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 POC1AQ8NBT0 407 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 OR2D3Q8NGH3 330 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 RPS4Y2Q8TD47 263 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 ZNRF4Q8WWF5 429 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 TMEM234Q8WY98 164 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 IL22RA2Q969J5 263 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 GPR146Q96CH1 333 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 ACY3Q96HD9 319 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 Q96M85 177 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 MS4A10Q96PG2 267 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 KLHDC3Q9BQ90 382 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 NUP210LQ5VU65 1888 aa8.15□□□□□ -1.1
SMARCAL1-202ENST00000358207 SPAARA0A1B0GVQ0 90 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 VSTM2BA6NLU5 285 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 FGF17O60258 216 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 SEC11BP0C7V7 166 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 PSG1P11464 419 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 CMPK1P30085 196 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 ADAM8P78325 824 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 DUSP2Q05923 314 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 ICAM4Q14773 271 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 TAF9Q16594 264 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 MPV17LQ2QL34 196 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 SMIM21Q3B7S5 101 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 OR4C11Q6IEV9 310 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 FIGLAQ6QHK4 219 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 TMEM256Q8N2U0 113 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 OR10S1Q8NGN2 331 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 FAM213BQ8TBF2 198 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 FAM71F1Q96KD3 344 aaPredicted RBP8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 MEGF9Q9H1U4 602 aa8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 MRPS28Q9Y2Q9 187 aaKnown RBP8.15□□□□□ -1.11
SMARCAL1-202ENST00000358207 A0A1B0GTH9 108 aa8.14□□□□□ -1.11
SMARCAL1-202ENST00000358207 A0A1B0GU03 582 aa8.14□□□□□ -1.11
SMARCAL1-202ENST00000358207 FITM1A5D6W6 292 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms