RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 FAM78BQ5VT40 261 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 LILRA6Q6PI73 481 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 MUC20Q8N307 709 aaPredicted RBP6.47□□□□□ -1.37
VPS13A-202ENST00000357409 FAM109AQ8N4B1 249 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 SCNM1Q9BWG6 230 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 TTTY12Q9BZ98 90 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 NKX2-6A6NCS4 301 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 THBS4P35443 961 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 DND1Q8IYX4 353 aaKnown RBP6.47□□□□□ -1.37
VPS13A-202ENST00000357409 CADM4Q8NFZ8 388 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 BCL2L2Q92843 193 aaPredicted RBP6.47□□□□□ -1.37
VPS13A-202ENST00000357409 POM121Q96HA1 1249 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 DCTN5Q9BTE1 182 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 JAM3Q9BX67 310 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 C3orf85A0A1B0GTC6 90 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 SNAPINO95295 136 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 CTLA4P16410 223 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 SLC25A21Q9BQT8 299 aaPredicted RBP6.47□□□□□ -1.37
VPS13A-202ENST00000357409 CYSLTR2Q9NS75 346 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 CACNG5Q9UF02 275 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 PPIAL4EA0A075B759 164 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 PPIAL4DF5H284 164 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 IGLV3-27P01718 113 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 PPIAL4FP0DN26 164 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 PRRX1P54821 245 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 MPV17LQ2QL34 196 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 LINC01465Q8N7H1 131 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 OR4D9Q8NGE8 314 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 YAE1D1Q9NRH1 226 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 PPIAL4AQ9Y536 164 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 ICMTO60725 284 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 PTGFRP43088 359 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 SLC22A18ASQ8N1D0 253 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 M1APQ8TC57 530 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 SMIM7Q9BQ49 75 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 CXXC4Q9H2H0 198 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 NIT2Q9NQR4 276 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 STARD10Q9Y365 291 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 TMEM272A0A1B0GTI8 110 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 SERPINE3A8MV23 424 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 C16orf97H3BN30 126 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 AQP6Q13520 282 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 TBCEQ15813 527 aaPredicted RBP6.47□□□□□ -1.37
VPS13A-202ENST00000357409 FAM24BQ8N5W8 94 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 WNT2BQ93097 391 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 FOXJ2Q9P0K8 574 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 MVDP53602 400 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 SRSF6Q13247 344 aaKnown RBP6.47□□□□□ -1.37
VPS13A-202ENST00000357409 RBPMS2Q6ZRY4 209 aaKnown RBP6.47□□□□□ -1.37
VPS13A-202ENST00000357409 ADAD2Q8NCV1 583 aaKnown RBP6.47□□□□□ -1.37
VPS13A-202ENST00000357409 UCK1Q9HA47 277 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 A0A1B0GV72 72 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 SEMA7AO75326 666 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 CRYBA2P53672 197 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 TAS2R45P59539 299 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 CDK5R1Q15078 307 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 RFPL4BQ6ZWI9 263 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 FA2HQ7L5A8 372 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 SLC38A6Q8IZM9 456 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 NTNG2Q96CW9 530 aa6.47□□□□□ -1.37
VPS13A-202ENST00000357409 PLPP3O14495 311 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 PRAF2O60831 178 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 LALBAP00709 142 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 SPP1P10451 314 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 RPL29P47914 159 aaKnown RBP6.46□□□□□ -1.37
VPS13A-202ENST00000357409 XAF1Q6GPH4 301 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 LINC00469Q8N7U9 141 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 FAM216AQ8WUB2 273 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 KIR2DS1A0A191URI9 304 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 OR4C46A6NHA9 309 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 PTBP3O95758 552 aaKnown RBP6.46□□□□□ -1.37
VPS13A-202ENST00000357409 KIR2DS4P43632 304 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 KIR2DS1Q14954 304 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 PRR31Q5SQ13 230 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 OR2A2Q6IF42 318 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 OR4F17Q8NGA8 305 aa6.46□□□□□ -1.37
VPS13A-202ENST00000357409 IFITM5A6NNB3 132 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 H7BYZ3 331 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 TAS2R60P59551 318 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF154Q13106 437 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 NUFIP2Q7Z417 695 aaKnown RBP6.46□□□□□ -1.38
VPS13A-202ENST00000357409 OR8I2Q8N0Y5 310 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 ITLN1Q8WWA0 313 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 MN1Q10571 1320 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-202ENST00000357409 ZAR1LA6NP61 321 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 PTTG1O95997 202 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 ATP5J2P56134 94 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 ISL1P61371 349 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 ISXQ2M1V0 245 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 BVESQ8NE79 360 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 SIGLEC12Q96PQ1 595 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 PEBP1P30086 187 aaKnown RBP6.46□□□□□ -1.38
VPS13A-202ENST00000357409 HTRA4P83105 476 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-202ENST00000357409 EGR3Q06889 387 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 RBPMSQ93062 196 aaKnown RBP6.46□□□□□ -1.38
VPS13A-202ENST00000357409 TMEM56Q96MV1 263 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 C9JCJ5 164 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 GSTZ1O43708 216 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-202ENST00000357409 FABP1P07148 127 aa6.46□□□□□ -1.38
VPS13A-202ENST00000357409 USF1P22415 310 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms