RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CXXC4Q9H2H0 198 aa10.41□□□□□ -0.74
COL9A1-202ENST00000357250 TRGV8A0A0C4DH27 118 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 EPOPA6NHQ4 379 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 ADAM20O43506 726 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 MPV17LQ2QL34 196 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 GFRALQ6UXV0 394 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 SSX8Q7RTT4 187 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 RASL10BQ96S79 203 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 PECRQ9BY49 303 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 WDR61Q9GZS3 305 aaKnown RBP10.4□□□□□ -0.74
COL9A1-202ENST00000357250 WDR54Q9H977 334 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 AMDHD2Q9Y303 409 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 ABCA7Q8IZY2 2146 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 TMEM265A0A087WTH1 108 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 TCRBV16S1A1N1A0A5B0 115 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 SHISA8B8ZZ34 492 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 TMEM108Q6UXF1 575 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 OR8B12Q8NGG6 310 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 VSTM2AQ8TAG5 236 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 PTP4A1Q93096 173 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 ST6GAL2Q96JF0 529 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 TMEM147Q9BVK8 224 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 ALX4Q9H161 411 aaPredicted RBP10.4□□□□□ -0.74
COL9A1-202ENST00000357250 OR2M5A3KFT3 312 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 OR3A4PP47883 348 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 RHOBP62745 196 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 TMEM241Q24JQ0 296 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 C4orf17Q53FE4 359 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 C6orf201Q7Z4U5 140 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 OR2Z1Q8NG97 314 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 OR5C1Q8NGR4 320 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 SP7Q8TDD2 431 aaPredicted RBP10.4□□□□□ -0.74
COL9A1-202ENST00000357250 RNF133Q8WVZ7 376 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 SMOC1Q9H4F8 434 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 LHX9Q9NQ69 397 aa10.4□□□□□ -0.74
COL9A1-202ENST00000357250 A0A1W2PN81 502 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 H3BP45 60 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 CHRNA7P36544 502 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 KIR2DL1P43626 348 aaPredicted RBP10.39□□□□□ -0.75
COL9A1-202ENST00000357250 GGTLC2Q14390 218 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 SP6Q3SY56 376 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 LINC00596Q86U02 117 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 TMEM104Q8NE00 496 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 SLC52A3Q9NQ40 469 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 ZNF835Q9Y2P0 537 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 FAM96BQ9Y3D0 163 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 MAP1LC3B2A6NCE7 125 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 J3QR89 54 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 VDAC1P21796 283 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 SUMO1P63165 101 aaKnown RBP10.39□□□□□ -0.75
COL9A1-202ENST00000357250 SPATA46Q5T0L3 261 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 ZBTB34Q8NCN2 500 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 TGIF2Q9GZN2 237 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 MAP1LC3BQ9GZQ8 125 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 AAMDCQ9H7C9 122 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 AMMECR1Q9Y4X0 333 aaPredicted RBP10.39□□□□□ -0.75
COL9A1-202ENST00000357250 MMP7P09237 267 aaPredicted RBP10.39□□□□□ -0.75
COL9A1-202ENST00000357250 NTF3P20783 257 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 SDHBP21912 280 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 CSF2RBP32927 897 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 INSL4Q14641 139 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 CD226Q15762 336 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 SLC25A42Q86VD7 318 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 SLC24A4Q8NFF2 622 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 SARGQ9BW04 601 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 TOLLIPQ9H0E2 274 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 BARX1Q9HBU1 254 aaPredicted RBP10.39□□□□□ -0.75
COL9A1-202ENST00000357250 FRRS1LQ9P0K9 344 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 STARD10Q9Y365 291 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 NBASA2RRP1 2371 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 HSBP1O75506 76 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 CRHP06850 196 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 PNLIPP16233 465 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 CA6P23280 308 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 FFAR4Q5NUL3 377 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 TMEM88Q6PEY1 159 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 C1orf174Q8IYL3 243 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 NECAP1Q8NC96 275 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 OR4D11Q8NGI4 311 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 ARID2Q68CP9 1835 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 RGPD4Q7Z3J3 1758 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 SDK2Q58EX2 2172 aa10.39□□□□□ -0.75
COL9A1-202ENST00000357250 DUXBA0A1W2PPF3 345 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 TRDCB7Z8K6 153 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 CDS2O95674 445 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 CD82P27701 267 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 KLF3P57682 345 aaPredicted RBP10.38□□□□□ -0.75
COL9A1-202ENST00000357250 SIGIRRQ6IA17 410 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 FAM122AQ96E09 287 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 UTRNP46939 3433 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 SPINT1O43278 529 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 BGLAPP02818 100 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 ERVFC1-1P60608 527 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 ZNF528Q3MIS6 628 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 OR1L4Q8NGR5 311 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 C12orf57Q99622 126 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 MIXL1Q9H2W2 232 aa10.38□□□□□ -0.75
COL9A1-202ENST00000357250 THYN1Q9P016 225 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms