RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 NDUFB7P17568 137 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 BTF3P20290 206 aaKnown RBP13.28□□□□□ -0.28
VAT1-201ENST00000355653 DDTP30046 118 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.28□□□□□ -0.28
VAT1-201ENST00000355653 LGI3Q8N145 548 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 OR2C3Q8N628 320 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 C18orf12Q96KH6 178 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 C8orf33Q9H7E9 229 aaPredicted RBP13.28□□□□□ -0.28
VAT1-201ENST00000355653 WSB1Q9Y6I7 421 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 SHANK1Q9Y566 2161 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 NCOA6Q14686 2063 aaPredicted RBP13.28□□□□□ -0.28
VAT1-201ENST00000355653 A0A087X0M5 115 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 A0A1B0GX30 115 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 FAM230AA0A1W2PPH8 454 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 OR5H15A6NDH6 313 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 OR5H1A6NKK0 313 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 TRGC1P0CF51 173 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 ZNF41P51814 821 aaPredicted RBP13.28□□□□□ -0.28
VAT1-201ENST00000355653 RUNX1Q01196 453 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 PPA1Q15181 289 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 HAS2Q92819 552 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 TVP23CQ96ET8 276 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 SUCNR1Q9BXA5 334 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 SMOC1Q9H4F8 434 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 CEP290O15078 2479 aa13.28□□□□□ -0.28
VAT1-201ENST00000355653 RALGAPA1Q6GYQ0 2036 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 ASXL3Q9C0F0 2248 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 A0A1B0GW64 132 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 IGSF23A1L1A6 192 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 ST8SIA5O15466 376 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 SSSCA1O60232 199 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 CST7O76096 145 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 BLKP51451 505 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 ZNF133P52736 654 aaPredicted RBP13.27□□□□□ -0.28
VAT1-201ENST00000355653 MTCP1P56278 107 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 GRB2P62993 217 aaKnown RBP13.27□□□□□ -0.28
VAT1-201ENST00000355653 ZNF266Q14584 549 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 RTL6Q6ICC9 239 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 MSI2Q96DH6 328 aaKnown RBP13.27□□□□□ -0.28
VAT1-201ENST00000355653 KLHDC7BQ96G42 594 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 Q96M66 194 aa13.27□□□□□ -0.28
VAT1-201ENST00000355653 A0A1W2PNV4 684 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 TSTD3H0UI37 97 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 TRAF3IP2O43734 574 aaPredicted RBP13.27□□□□□ -0.29
VAT1-201ENST00000355653 DHRS3O75911 302 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 LSM6P62312 80 aaKnown RBP13.27□□□□□ -0.29
VAT1-201ENST00000355653 ICAM4Q14773 271 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 PDCD1Q15116 288 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 SLC16A14Q7RTX9 510 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 FBXL14Q8N1E6 418 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 DEFB119Q8N690 84 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 OR1L3Q8NH93 324 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 TMEM171Q8WVE6 324 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 FRZBQ92765 325 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 NKX2-4Q9H2Z4 354 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 BCO1Q9HAY6 547 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 SDHAF3Q9NRP4 125 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 DECR2Q9NUI1 292 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 TMED3Q9Y3Q3 217 aa13.27□□□□□ -0.29
VAT1-201ENST00000355653 NKX2-6A6NCS4 301 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 CCDC85CA6NKD9 419 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 SCAF4O95104 1147 aaKnown RBP13.26□□□□□ -0.29
VAT1-201ENST00000355653 FOSL2P15408 326 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 ALDH3B1P43353 468 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 DEFB133Q30KQ1 61 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 SLC25A47Q6Q0C1 308 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 OR5C1Q8NGR4 320 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 TP53RKQ96S44 253 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 SMDT1Q9H4I9 107 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 KIAA1456Q9P272 454 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 PRUNE2Q8WUY3 3088 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 A0A087WWC5 75 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 BTBD17A6NE02 478 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 MDKP21741 143 aaPredicted RBP13.26□□□□□ -0.29
VAT1-201ENST00000355653 RPL23AP62750 156 aaKnown RBP13.26□□□□□ -0.29
VAT1-201ENST00000355653 SHHQ15465 462 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 REC114Q7Z4M0 266 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 C17orf78Q8N4C9 275 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 FOLR1P15328 257 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 GUCA1AP43080 201 aaPredicted RBP13.26□□□□□ -0.29
VAT1-201ENST00000355653 FASLGP48023 281 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 PKIAP61925 76 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 AKR1C8PQ5T2L2 129 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 TMEM123Q8N131 208 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 SNIP1Q8TAD8 396 aaKnown RBP13.26□□□□□ -0.29
VAT1-201ENST00000355653 ABHD5Q8WTS1 349 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 SNX22Q96L94 193 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 PACRGQ96M98 296 aaPredicted RBP13.26□□□□□ -0.29
VAT1-201ENST00000355653 CRLF2Q9HC73 371 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 CLEC1BQ9P126 229 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 HSF4Q9ULV5 492 aa13.26□□□□□ -0.29
VAT1-201ENST00000355653 GLIPR1P48060 266 aa13.25□□□□□ -0.29
VAT1-201ENST00000355653 KIAA0895LQ68EN5 471 aa13.25□□□□□ -0.29
VAT1-201ENST00000355653 PP6455Q8WZ26 134 aa13.25□□□□□ -0.29
VAT1-201ENST00000355653 FAM210BQ96KR6 192 aa13.25□□□□□ -0.29
VAT1-201ENST00000355653 CDCA3Q99618 268 aaPredicted RBP13.25□□□□□ -0.29
VAT1-201ENST00000355653 SYT3Q9BQG1 590 aa13.25□□□□□ -0.29
VAT1-201ENST00000355653 DCAF16Q9NXF7 216 aa13.25□□□□□ -0.29
VAT1-201ENST00000355653 PISDQ9UG56 409 aa13.25□□□□□ -0.29
VAT1-201ENST00000355653 FOXD3Q9UJU5 478 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms