RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CST4P01036 141 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 SLC35A1P78382 337 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 MRPS11P82912 194 aaKnown RBP8.23□□□□□ -1.09
SMG6-202ENST00000354901 ANKRD55Q3KP44 614 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 KLHL24Q6TFL4 600 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 ERASQ7Z444 233 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 PLXDC1Q8IUK5 500 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 ZNF283Q8N7M2 679 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 SLC38A9Q8NBW4 561 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 C11orf40Q8WZ69 217 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 FAM71F1Q96KD3 344 aaPredicted RBP8.23□□□□□ -1.09
SMG6-202ENST00000354901 NIPSNAP3BQ9BS92 247 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 WNT16Q9UBV4 365 aa8.23□□□□□ -1.09
SMG6-202ENST00000354901 ZNF724A8MTY0 619 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 FDX2Q6P4F2 183 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 SLC22A25Q6T423 547 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 H1FNTQ75WM6 255 aaPredicted RBP8.22□□□□□ -1.09
SMG6-202ENST00000354901 CADM4Q8NFZ8 388 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 OR5D18Q8NGL1 313 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 OR4K15Q8NH41 348 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 OR51E1Q8TCB6 317 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 TMEM234Q8WY98 164 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 SLAMF6Q96DU3 332 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 NICN1Q9BSH3 213 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 URM1Q9BTM9 101 aaKnown RBP8.22□□□□□ -1.09
SMG6-202ENST00000354901 BANF2Q9H503 90 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 SERINC1Q9NRX5 453 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 FLVCR1Q9Y5Y0 555 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 CELSR3Q9NYQ7 3312 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 TRAV34A0A0B4J273 112 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 TRBV11-1A0A0K0K1C0 115 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 WIPF3A6NGB9 483 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 PIAS2O75928 621 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 ZNF205O95201 554 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 HKR1P10072 659 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 GLRA1P23415 457 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 CX3CR1P49238 355 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 RAB11AP62491 216 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 MFAP5Q13361 173 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 P2RY6Q15077 328 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 C1QL4Q86Z23 238 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 ASB10Q8WXI3 467 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 R3HDM4Q96D70 268 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 SDSLQ96GA7 329 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 ST6GALNAC5Q9BVH7 336 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 LAMP3Q9UQV4 416 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 PAM16Q9Y3D7 125 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 NCOA6Q14686 2063 aaPredicted RBP8.22□□□□□ -1.09
SMG6-202ENST00000354901 A0A1W2PP11 408 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 A0A1W2PQD3 144 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 FTCDNL1E5RQL4 147 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 H3BMH7 237 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 TIAF1O95411 115 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 MPIG6BO95866 241 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 PET100P0DJ07 73 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 BCKDHBP21953 392 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 ANOS1P23352 680 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 CEACAM8P31997 349 aaPredicted RBP8.22□□□□□ -1.09
SMG6-202ENST00000354901 PTTG1IPP53801 180 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 ERVS71-1P61550 626 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 RSPO4Q2I0M5 234 aaPredicted RBP8.22□□□□□ -1.09
SMG6-202ENST00000354901 ZNF66Q6ZN08 573 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 Q6ZVH6 145 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 OR5R1Q8NH85 324 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 SVIPQ8NHG7 77 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 THRSPQ92748 146 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 REEP6Q96HR9 211 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 CABLES2Q9BTV7 478 aa8.22□□□□□ -1.09
SMG6-202ENST00000354901 TTRP02766 147 aa8.21□□□□□ -1.09
SMG6-202ENST00000354901 OR5H8P0DN80 308 aa8.21□□□□□ -1.09
SMG6-202ENST00000354901 PNLIPP16233 465 aa8.21□□□□□ -1.09
SMG6-202ENST00000354901 IGFBP3P17936 291 aaPredicted RBP8.21□□□□□ -1.09
SMG6-202ENST00000354901 SCAND1P57086 179 aa8.21□□□□□ -1.09
SMG6-202ENST00000354901 ARFRP1Q13795 201 aa8.21□□□□□ -1.09
SMG6-202ENST00000354901 PTCRAQ6ISU1 281 aaPredicted RBP8.21□□□□□ -1.09
SMG6-202ENST00000354901 ZNF774Q6NX45 483 aa8.21□□□□□ -1.09
SMG6-202ENST00000354901 DNM1P34Q6PK57 102 aa8.21□□□□□ -1.09
SMG6-202ENST00000354901 ABHD12BQ7Z5M8 362 aaPredicted RBP8.21□□□□□ -1.09
SMG6-202ENST00000354901 CPEB2Q7Z5Q1 589 aaKnown RBP8.21□□□□□ -1.09
SMG6-202ENST00000354901 IL22RA2Q969J5 263 aa8.21□□□□□ -1.09
SMG6-202ENST00000354901 SLC5A6Q9Y289 635 aa8.21□□□□□ -1.09
SMG6-202ENST00000354901 NUP210LQ5VU65 1888 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 CACNA1EQ15878 2313 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 BORCS7-ASMTA0A0B4J1R7 106 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 MEGF11A6BM72 1044 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 A6NIZ1 184 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 VSTM2BA6NLU5 285 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 HSPB2A8KAH6 182 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 JTBO76095 146 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 CD82P27701 267 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 HSD11B1P28845 292 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 OR3A2P47893 321 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 RAP1BP61224 184 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 H3F3AP84243 136 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 UNC119Q13432 240 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 HSPB2Q16082 182 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 PNLIPRP3Q17RR3 467 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 PRAMEF20Q5VT98 475 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 SMIM15Q7Z3B0 74 aa8.21□□□□□ -1.1
SMG6-202ENST00000354901 SLC25A45Q8N413 288 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms