RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ZNF385AQ96PM9 386 aaKnown RBP8.82□□□□□ -1
SYNE1-203ENST00000354674 VPS25Q9BRG1 176 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 PBDC1Q9BVG4 233 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 M0QZ24 198 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 MMP9P14780 707 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 DIO1P49895 249 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 GGNQ86UU5 652 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 GABRG1Q8N1C3 465 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 TMEM251Q8N6I4 163 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 EXD3Q8N9H8 876 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 OR1J1Q8NGS3 322 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 OR10AC1Q8NH08 325 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 OR14L1PQ8NHC6 308 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 RAB24Q969Q5 203 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 ADGRG7Q96K78 797 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 OR5B2Q96R09 309 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 SLC25A31Q9H0C2 315 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 TXNIPQ9H3M7 391 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 B3GAT1Q9P2W7 334 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 A0A1W2PNR3 127 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 GJE1A6NN92 205 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 ZNF705FA8MVS1 300 aaPredicted RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 H7C417 338 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 J3QRE1 110 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 CTDSPLO15194 276 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 DNPH1O43598 174 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 ZNF705DP0CH99 300 aaPredicted RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 ZNF705BP0CI00 300 aaPredicted RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 CDKN2AP42771 156 aaKnown RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 RPS11P62280 158 aaKnown RBP eCLIP8.81□□□□□ -1
SYNE1-203ENST00000354674 SLC35A1P78382 337 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 WIPI1Q5MNZ9 446 aaPredicted RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 DMKNQ6E0U4 476 aaPredicted RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 ZNF774Q6NX45 483 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 ZNF880Q6PDB4 577 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 GVQW1Q8N7I0 195 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 OR52E2Q8NGJ4 325 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 OR4K13Q8NH42 304 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 RASD2Q96D21 266 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 Q96M85 177 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 TUBG2Q9NRH3 451 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 TMEM100Q9NV29 134 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 HAO2Q9NYQ3 351 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 MTFP1Q9UDX5 166 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 VSIG4Q9Y279 399 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 A0A0J9YW62 118 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 AQP7P3A6NL99 342 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 ADRA2CP18825 462 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 PRSS3P35030 304 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 SFTPDP35247 375 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 SLC25A1P53007 311 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 RPL27P61353 136 aaKnown RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 ADAM8P78325 824 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 TLE3Q04726 772 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 ZNF345Q14585 488 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 HAGHQ16775 308 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 MRPL41Q8IXM3 137 aaKnown RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 NECAP1Q8NC96 275 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 SLC30A7Q8NEW0 376 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 OR51A4Q8NGJ6 313 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 HAVCR1Q96D42 359 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 PLEKHA1Q9HB21 404 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 TRAV8-7A0A075B6U6 113 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 K7ENP7 123 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 NXPH2O95156 264 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 PTBP3O95758 552 aaKnown RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 SCGB1D2O95969 90 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 MAGEA5P43359 124 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 SIRPAP78324 504 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 PAX5Q02548 391 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 SOHLH1Q5JUK2 328 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 HIST2H3PS2Q5TEC6 136 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 AADACL3Q5VUY0 350 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 INO80CQ6PI98 192 aaPredicted RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 FAM180AQ6UWF9 173 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.81□□□□□ -1
SYNE1-203ENST00000354674 CMTM1Q8IZ96 169 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 GALNT14Q96FL9 552 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 NMNAT3Q96T66 252 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 RNF126Q9BV68 326 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 ZDHHC11Q9H8X9 412 aa8.81□□□□□ -1
SYNE1-203ENST00000354674 TNRC6AQ8NDV7 1962 aaKnown RBP8.8□□□□□ -1
SYNE1-203ENST00000354674 TRAV17A0A0B4J275 112 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 ZNF814B7Z6K7 855 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 J3QW42 95 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 ZFPL1O95159 310 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 OPN1LWP04000 364 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 CELA3AP09093 270 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 HLA-DOBP13765 273 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 CLDN15P56746 228 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 ACKR1Q16570 336 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 ZPLD1Q8TCW7 415 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 CLUHP3Q96NS8 147 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 URM1Q9BTM9 101 aaKnown RBP8.8□□□□□ -1
SYNE1-203ENST00000354674 LPAR2Q9HBW0 351 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 ST6GALNAC2Q9UJ37 374 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 SLC22A31A6NKX4 558 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 FAM157AC9JC47 383 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 C11orf98E9PRG8 122 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 SNAPC5O75971 98 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms