RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 RPH3ALQ9UNE2 315 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 RNF24Q9Y225 148 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 ANKUB1A6NFN9 424 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 TSPAN2O60636 221 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 CST7O76096 145 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 DUSP1P28562 367 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 TMEM187Q14656 261 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 TMEM183BQ1AE95 376 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 TPTE2P1Q5T6R2 138 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 GRINAQ7Z429 371 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 GCNT2Q8N0V5 402 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 LGI3Q8N145 548 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 TMEM217Q8N7C4 229 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 SUMF1Q8NBK3 374 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 IFI44Q8TCB0 444 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 SOCS4Q8WXH5 440 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 RASL10BQ96S79 203 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 CENPMQ9NSP4 180 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 OR6C3Q9NZP0 311 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 B3GALT1Q9Y5Z6 326 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 TRPM6Q9BX84 2022 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 THSD7BQ9C0I4 1608 aa11.58□□□□□ -0.56
IFT88-202ENST00000351808 YPEL1O60688 119 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 LILRA1O75019 489 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 BCL2P10415 239 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 VN1R17PQ8TDU5 208 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 YPEL2Q96QA6 119 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 TUBG2Q9NRH3 451 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 CISD1Q9NZ45 108 aaKnown RBP11.57□□□□□ -0.56
IFT88-202ENST00000351808 SPAG17Q6Q759 2223 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 CXorf51AA0A1B0GTR3 108 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 MAP1LC3B2A6NCE7 125 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 HIDE1A8MVS5 230 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 B3GALT2O43825 422 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 DUSP11O75319 330 aaKnown RBP11.57□□□□□ -0.56
IFT88-202ENST00000351808 SELPP16109 830 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 FGF8P55075 233 aaPredicted RBP11.57□□□□□ -0.56
IFT88-202ENST00000351808 RANP62826 216 aaKnown RBP11.57□□□□□ -0.56
IFT88-202ENST00000351808 FKBP1BP68106 108 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 SLC25A24Q6NUK1 477 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 LCN15Q6UWW0 184 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 Q6ZWC4 215 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 ADAMTS18Q8TE60 1221 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 C1orf147Q96MC9 270 aaPredicted RBP11.57□□□□□ -0.56
IFT88-202ENST00000351808 MAP1LC3BQ9GZQ8 125 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 FBLN5Q9UBX5 448 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 PRSS50Q9UI38 385 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 TMEM238C9JI98 176 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 HCRTR2O43614 444 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 PITX3O75364 302 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 OR2J2O76002 312 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 PPBPP02775 128 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 CDKN1AP38936 164 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 TLE1Q04724 770 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 SHHQ15465 462 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 C9orf50Q5SZB4 431 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 OGFOD3Q6PK18 319 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 DPPA3Q6W0C5 159 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 PRSS41Q7RTY9 318 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 ATG4DQ86TL0 474 aaPredicted RBP11.57□□□□□ -0.56
IFT88-202ENST00000351808 KCNG3Q8TAE7 436 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 ZNF524Q96C55 264 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 Q9N2K0 584 aa11.57□□□□□ -0.56
IFT88-202ENST00000351808 CCDC163A0A0D9SF12 145 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 PRSS37A4D1T9 235 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 SERINC4A6NH21 518 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 CEBPZOSA8MTT3 80 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 ZNF732B4DXR9 585 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 SLC33A1O00400 549 aaPredicted RBP11.56□□□□□ -0.56
IFT88-202ENST00000351808 TMEM225BP0DP42 221 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 GCH1P30793 250 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 DYNLT3P51808 116 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 ZNF141Q15928 474 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 OR5D14Q8NGL3 314 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 LIPHQ8WWY8 451 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 SMIM7Q9BQ49 75 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 PLA2G3Q9NZ20 509 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 CCL26Q9Y258 94 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 PCNX3Q9H6A9 2034 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 IGLV1-36A0A0B4J1U3 117 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 AKR1A1P14550 325 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 BSXQ3C1V8 233 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 PHLDA2Q53GA4 152 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 SLC24A4Q8NFF2 622 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 OR51T1Q8NGJ9 327 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 OR2T10Q8NGZ9 312 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 RTN4IP1Q8WWV3 396 aaPredicted RBP11.56□□□□□ -0.56
IFT88-202ENST00000351808 MOB3AQ96BX8 217 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 SPACA7Q96KW9 195 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 LIME1Q9H400 295 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 THAP10Q9P2Z0 257 aaPredicted RBP11.56□□□□□ -0.56
IFT88-202ENST00000351808 COA3Q9Y2R0 106 aaPredicted RBP11.56□□□□□ -0.56
IFT88-202ENST00000351808 CLDN16Q9Y5I7 305 aa11.56□□□□□ -0.56
IFT88-202ENST00000351808 PROB1E7EW31 1015 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
IFT88-202ENST00000351808 PRKNO60260 465 aaPredicted RBP11.55□□□□□ -0.56
IFT88-202ENST00000351808 GPR75O95800 540 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 HRASP01112 189 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 HPNP05981 417 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms